jellyfish 2.3.0-12ubuntu2 source package in Ubuntu
Changelog
jellyfish (2.3.0-12ubuntu2) jammy; urgency=medium * No-change rebuild with Python 3.10 only -- Graham Inggs <email address hidden> Thu, 17 Mar 2022 19:24:43 +0000
Upload details
- Uploaded by:
- Graham Inggs
- Uploaded to:
- Jammy
- Original maintainer:
- Debian Med
- Architectures:
- amd64 arm64 armel armhf i386 mips64el ppc64el hppa hurd-i386 ia64 kfreebsd-amd64 kfreebsd-i386 riscv64 all
- Section:
- science
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Jammy | release | universe | science |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| jellyfish_2.3.0.orig.tar.gz | 663.2 KiB | 29ead991de90151dbe4a2717f7ac30b3852296c9cbdda8b001121a1f2fa714db |
| jellyfish_2.3.0-12ubuntu2.debian.tar.xz | 14.6 KiB | 4f578f01e51ef2e486ec3f5e38ae36e99179b51a08d79b0b4b218cdeacd15973 |
| jellyfish_2.3.0-12ubuntu2.dsc | 3.1 KiB | e17d68661d7b9325e990bff286cab6d8ea7a69a2ba66ba7a6b57fe8f101d14ab |
Available diffs
- diff from 2.3.0-12ubuntu1 to 2.3.0-12ubuntu2 (330 bytes)
Binary packages built by this source
- jellyfish: No summary available for jellyfish in ubuntu kinetic.
No description available for jellyfish in ubuntu kinetic.
- jellyfish-dbgsym: debug symbols for jellyfish
- jellyfish-examples: No summary available for jellyfish-examples in ubuntu kinetic.
No description available for jellyfish-examples in ubuntu kinetic.
- libjellyfish-2.0-2: count k-mers in DNA sequences (dynamic library of jellyfish)
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in
DNA. A k-mer is a substring of length k, and counting the occurrences
of all such substrings is a central step in many analyses of DNA
sequence. JELLYFISH can count k-mers using an order of magnitude less
memory and an order of magnitude faster than other k-mer counting
packages by using an efficient encoding of a hash table and by
exploiting the "compare-and-swap" CPU instruction to increase
parallelism.
.
JELLYFISH is a command-line program that reads FASTA and multi-FASTA
files containing DNA sequences. It outputs its k-mer counts in an
binary format, which can be translated into a human-readable text
format using the "jellyfish dump" command.
.
This package contains the dynamic library the main executable of
jellyfish is linked to.
- libjellyfish-2.0-2-dbgsym: debug symbols for libjellyfish-2.0-2
- libjellyfish-2.0-dev: count k-mers in DNA sequences (development files of jellyfish)
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in
DNA. A k-mer is a substring of length k, and counting the occurrences
of all such substrings is a central step in many analyses of DNA
sequence. JELLYFISH can count k-mers using an order of magnitude less
memory and an order of magnitude faster than other k-mer counting
packages by using an efficient encoding of a hash table and by
exploiting the "compare-and-swap" CPU instruction to increase
parallelism.
.
JELLYFISH is a command-line program that reads FASTA and multi-FASTA
files containing DNA sequences. It outputs its k-mer counts in an
binary format, which can be translated into a human-readable text
format using the "jellyfish dump" command.
.
This package contains the development files (static library and
header files)
- libjellyfish-perl: count k-mers in DNA sequences (Perl bindings of jellyfish)
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in
DNA. A k-mer is a substring of length k, and counting the occurrences
of all such substrings is a central step in many analyses of DNA
sequence. JELLYFISH can count k-mers using an order of magnitude less
memory and an order of magnitude faster than other k-mer counting
packages by using an efficient encoding of a hash table and by
exploiting the "compare-and-swap" CPU instruction to increase
parallelism.
.
JELLYFISH is a command-line program that reads FASTA and multi-FASTA
files containing DNA sequences. It outputs its k-mer counts in an
binary format, which can be translated into a human-readable text
format using the "jellyfish dump" command.
.
This package contains the Perl bindings of jellyfish.
- libjellyfish-perl-dbgsym: debug symbols for libjellyfish-perl
- python3-dna-jellyfish: No summary available for python3-dna-jellyfish in ubuntu kinetic.
No description available for python3-
dna-jellyfish in ubuntu kinetic.
- python3-dna-jellyfish-dbgsym: debug symbols for python3-dna-jellyfish
