Ubuntu
ngmlr package

ngmlr 0.2.7+git20210816.a2a31fb+dfsg-2 source package in Ubuntu

Changelog

ngmlr (0.2.7+git20210816.a2a31fb+dfsg-2) unstable; urgency=medium

  * Add patch to fix arm build
  * d/control: Remove Pranav from uploaders (not active)
  * d/t/run-unit-test: diff with -u flag

 -- Nilesh Patra <email address hidden>  Thu, 14 Oct 2021 17:34:16 +0530

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe misc
Noble release universe misc
Mantic release universe misc
Lunar release universe misc
Jammy release universe misc

Downloads

File Size SHA-256 Checksum
ngmlr_0.2.7+git20210816.a2a31fb+dfsg-2.dsc 2.2 KiB dab2d6db7c69b2edeb6a1edf4ca36d2a1644e3a5c7ce0f362bb7df1a5c20742c
ngmlr_0.2.7+git20210816.a2a31fb+dfsg.orig.tar.gz 652.2 KiB df7d9a0074b4d5d307258b8f23e1df2960f6af071bac07c41e64d38ef442592d
ngmlr_0.2.7+git20210816.a2a31fb+dfsg-2.debian.tar.xz 7.9 KiB e919ef334b228ca2e49701a28f0a5f40939a1fb0d3c5a0fe83032ca14d32cba1

No changes file available.

Binary packages built by this source

ngmlr: CoNvex Gap-cost alignMents for Long Reads

 Ngmlr is a long-read mapper designed to sensitively align PacBilo or
 Oxford Nanopore to (large) reference genomes. It was designed to quickly
 and correctly align the reads, including those spanning (complex)
 structural variations. Ngmlr uses an SV aware k-mer search to find
 approximate mapping locations for a read and then a banded Smith-
 Waterman alignment algorithm to compute the final alignment. Ngmlr uses
 a convex gap cost model that penalizes gap extensions for longer gaps
 less than for shorter ones to compute precise alignments.

ngmlr-dbgsym: debug symbols for ngmlr