Ubuntu
samblaster package

samblaster 0.1.26-4 source package in Ubuntu

Changelog

samblaster (0.1.26-4) unstable; urgency=medium

  * Team upload.
  * Fix watch file
  * Standards-Version: 4.6.1 (routine-update)
  * Set upstream metadata fields: Repository-Browse.

 -- Andreas Tille <email address hidden>  Tue, 06 Dec 2022 15:33:46 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe misc
Noble release universe misc
Mantic release universe misc
Lunar release universe misc

Downloads

File Size SHA-256 Checksum
samblaster_0.1.26-4.dsc 2.0 KiB da071f56310d9afe0878f1f18aa2348607c4bb04fda82020623747f6bf017078
samblaster_0.1.26.orig.tar.gz 130.2 KiB 6b42a53d64a3ed340852028546693a24c860f236fd70e90c2b24fde9dcc4fd63
samblaster_0.1.26-4.debian.tar.xz 5.1 KiB 578c6b4a77d40bd8fa9b85d9b73142cdaff35d62bef890bf603572d6e545c12a

Available diffs

No changes file available.

Binary packages built by this source

samblaster: marks duplicates, extracts discordant/split reads

 Current "next-generation" sequencing technologies cannot tell what
 exact sequence they will be reading. They take what is available. And
 if some sequences are read very often, then this needs some extra
 biomedical thinking. The genome could for instance be duplicated.
 .
 samblaster is a fast and flexible program for marking duplicates in
 read-id grouped paired-end SAM files. It can also optionally output
 discordant read pairs and/or split read mappings to separate SAM files,
 and/or unmapped/clipped reads to a separate FASTQ file. When marking
 duplicates, samblaster will require approximately 20MB of memory per
 1M read pairs.

samblaster-dbgsym: debug symbols for samblaster