sibsim4 0.20-1 source package in Ubuntu
Changelog
sibsim4 (0.20-1) unstable; urgency=low * New upstream version * Added myself to uploaders * Standards-Version: 3.8.4 (no changes needed) * Source-Format: 3.0 (quilt) * Debhalper 7 -- Ubuntu Archive Auto-Sync <email address hidden> Sun, 09 May 2010 14:02:33 +0100
Upload details
- Uploaded by:
- Ubuntu Archive Auto-Sync
- Uploaded to:
- Maverick
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- science
- Urgency:
- Low Urgency
See full publishing history Publishing
Series | Published | Component | Section | |
---|---|---|---|---|
Precise | release | universe | science |
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
sibsim4_0.20.orig.tar.gz | 31.4 KiB | ee02ae5f678d6843cf3ba267140dfccf9648a60d1f01263ae70d405723a35463 |
sibsim4_0.20-1.debian.tar.gz | 2.4 KiB | 90aa1415ac46ba921d1a31cdaea5cc4524594b533eeaf1f2729d0d2525126036 |
sibsim4_0.20-1.dsc | 1.3 KiB | 4006e0a70b3190c9d49ccf3f9bd50c51a5acca356d5a4dbde1f83323f9b482e7 |
Available diffs
- diff from 0.17-1 to 0.20-1 (3.8 KiB)
Binary packages built by this source
- sibsim4: align expressed RNA sequences on a DNA template
The SIBsim4 project is based on sim4, which is a program designed to align
an expressed DNA sequence with a genomic sequence, allowing for introns.
SIBsim4 is a fairly extensive rewrite of the original code with the following
goals:
* speed improvement;
* allow large, chromosome scale, DNA sequences to be used;
* provide more detailed output about splice types;
* provide more detailed output about polyA sites;
* misc code cleanups and fixes.