Ubuntu
allelecount package

allelecount 4.3.0-2 source package in Ubuntu

Changelog

allelecount (4.3.0-2) unstable; urgency=medium

  * Fix watch file
  * Standards-Version: 4.6.1 (routine-update)

 -- Andreas Tille <email address hidden>  Fri, 30 Sep 2022 13:13:15 +0200

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Mantic release universe misc
Lunar release universe misc

Downloads

File Size SHA-256 Checksum
allelecount_4.3.0-2.dsc 2.4 KiB 87c4a389981ba4f8339c7366f02eb5091ccf162f94bbcdba1af20f5a2a550381
allelecount_4.3.0.orig.tar.gz 1.3 MiB 5363ae12c2385c962728336a4498b1a29c9eaa3d4a24492d0debf897771cfd3c
allelecount_4.3.0-2.debian.tar.xz 15.0 KiB 3c91d8a5f47b97d14d3eb1b8d80d0ea59b5af5657ee1241e760d319aa4213484

Available diffs

No changes file available.

Binary packages built by this source

allelecount: NGS copy number algorithms

 Support code for NGS copy number algorithms. Takes a file of locations
 and a [cr|b]am file and generates a count of coverage of each allele
 [ACGT] at that location (given any filter settings).
 .
 The alleleCount package primarily exists to prevent code duplication
 between some other projects, specifically AscatNGS and Battenberg.

allelecount-dbgsym: debug symbols for allelecount
liballelecount-perl: Perl interface to NGS copy number algorithms

 Support code for NGS copy number algorithms. Takes a file of locations
 and a [cr|b]am file and generates a count of coverage of each allele
 [ACGT] at that location (given any filter settings).
 .
 The alleleCount package primarily exists to prevent code duplication
 between some other projects, specifically AscatNGS and Battenberg.
 .
 This package provided the Perl interface to alleleCounter providing
 Sanger::CGP::AlleleCount::Genotype.