Ubuntu
augustus package

augustus 3.3.3+dfsg-2build1 source package in Ubuntu

Changelog

augustus (3.3.3+dfsg-2build1) focal; urgency=medium

  * No-change rebuild for libgcc-s1 package name change.

 -- Matthias Klose <email address hidden>  Sun, 22 Mar 2020 16:34:00 +0100

Upload details

Uploaded by:
Matthias Klose
Uploaded to:
Focal
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Focal release universe misc

Downloads

File Size SHA-256 Checksum
augustus_3.3.3+dfsg.orig.tar.xz 63.1 MiB f0686bb68abe7697f6b0fac6df48197ce89169b11e64c82dbb16c51f14aacfec
augustus_3.3.3+dfsg-2build1.debian.tar.xz 18.1 KiB b16f8346ca8aa926bcee3ce89d36e2adc62db8bcd668963070464c0bc8330f09
augustus_3.3.3+dfsg-2build1.dsc 2.3 KiB bd5cb9d2c1de5bb86d94357bb0a1f762809cfad09db02b7ce159935db45997b3

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Binary packages built by this source

augustus: gene prediction in eukaryotic genomes

 AUGUSTUS is a software for gene prediction in eukaryotic genomic sequences
 that is based on a generalized hidden Markov model (HMM), a probabilistic
 model of a sequence and its gene structure. After learning gene structures
 from a reference annotation, AUGUSTUS uses the HMM to recognize genes in a new
 sequence and annotates it with the regions of identified genes. External hints,
 e.g. from RNA sequencing, EST or protein alignments etc. can be used to guide
 and improve the gene finding process. The result is the set of most likely gene
 structures that comply with all given user constraints, if such gene
 structures exist.
 AUGUSTUS already includes prebuilt HMMs for many species, as well as scripts
 to train custom models using annotated genomes.

augustus-data: data files for AUGUSTUS

 This package contains pre-trained species models and other required
 architecture-independent data files for the AUGUSTUS gene finder. These are
 needed to identify gene structures in these or related organisms.

augustus-dbgsym: debug symbols for augustus
augustus-doc: No summary available for augustus-doc in ubuntu groovy.

No description available for augustus-doc in ubuntu groovy.