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bio-eagle package

bio-eagle 2.3.5-1build1 source package in Ubuntu

Changelog

bio-eagle (2.3.5-1build1) bionic; urgency=medium

  * No-change rebuild for boost soname change.

 -- Matthias Klose <email address hidden>  Thu, 26 Oct 2017 17:09:57 +0000

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Uploaded by:
Matthias Klose
Uploaded to:
Bionic
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

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File Size SHA-256 Checksum
bio-eagle_2.3.5.orig.tar.gz 1.6 MiB 95c1883f321eda4af09b11e916683e2c40d647609479d550557a6194a7a8f017
bio-eagle_2.3.5-1build1.debian.tar.xz 6.7 KiB 38b4d3d05b48364a53e2f9be1b31e62733a0e059c749ad6297474e6534ecd64a
bio-eagle_2.3.5-1build1.dsc 2.1 KiB 33ef98dc9f7c1fe5c1da233d027c3c5a135e8e18da5146fb84be1380f9c3bc2f

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Binary packages built by this source

bio-eagle: Haplotype phasing within a genotyped cohort or using a phased reference panel

 Eagle estimates haplotype phase either within a genotyped cohort or using a
 phased reference panel. The basic idea of the Eagle1 algorithm is to harness
 identity-by-descent among distant relatives—which is pervasive at very large
 sample sizes but rare among smaller numbers of samples—to rapidly call phase
 using a fast scoring approach. In contrast, the Eagle2 algorithm analyzes a
 full probabilistic model similar to the diploid Li-Stephens model used by
 previous HMM-based methods.
 .
 Please note: The executable was renamed to bio-eagle because of a name clash.
 Please read more about this in /usr/share/doc/bio-eagle/README.Debian.

bio-eagle-dbgsym: debug symbols for bio-eagle
bio-eagle-examples: Examples for bio-eagle

 Eagle estimates haplotype phase either within a genotyped cohort or using a
 phased reference panel. The basic idea of the Eagle1 algorithm is to harness
 identity-by-descent among distant relatives—which is pervasive at very large
 sample sizes but rare among smaller numbers of samples—to rapidly call phase
 using a fast scoring approach. In contrast, the Eagle2 algorithm analyzes a
 full probabilistic model similar to the diploid Li-Stephens model used by
 previous HMM-based methods.
 .
 This package provides some example data for eagle.