Ubuntu
biojava-live package

biojava-live 1:1.7.1-3 source package in Ubuntu

Changelog

biojava-live (1:1.7.1-3) unstable; urgency=low


  * Use libcommons-collections3-java instead of libcommons-collections-java 

 -- Olivier Sallou <email address hidden>  Tue, 10 Sep 2013 09:39:36 +0200

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
all
Section:
science
Urgency:
Low Urgency

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Series Pocket Published Component Section

Builds

Trusty: [FULLYBUILT] i386

Downloads

File Size SHA-256 Checksum
biojava-live_1.7.1-3.dsc 2.4 KiB 56842f3a0a7f197977546dd210218a849d5fb93d154c25d4677470e70b1abb91
biojava-live_1.7.1.orig.tar.gz 10.5 MiB 60211e48176ffb4371465e3118f7ca8f5837175f3798fd843d56c449e17ba57b
biojava-live_1.7.1-3.debian.tar.gz 8.6 KiB 14e0bff73acb7b3a8127df2435235bc59c279a336959e3bfe29f7f815bf6d6b7

Available diffs

No changes file available.

Binary packages built by this source

libbiojava-java: Java API to biological data and applications (default version)

 BioJava is an open-source project dedicated to providing a Java framework
 for processing biological data. It includes objects for manipulating
 sequences, file parsers, DAS client and server support, access to BioSQL
 and Ensembl databases, and powerful analysis and statistical routines
 including a dynamic programming toolkit.
 .
 BioJava is provided by a vibrant community which meets annually at
 the Bioinformatics Open Source Conference (BOSC) that traditionally
 accompanies the Intelligent Systems in Molecular Biology (ISMB)
 meeting. Much like BioPerl, the employment of this library is valuable
 for everybody active in the field because of the many tricks of the
 trade one learns just by communicating on the mailing list.
 .
 This is a wrapper package which should enable smooth upgrades to new
 versions.

libbiojava-java-demos: Example programs for BioJava

 The package comes with a wealth of use cases for BioJava. It is generated
 together with the API documentation but because of its size of ~3.7MB it
 was decided to distribute it separately.

libbiojava-java-doc: [Biology] Documentation for BioJava

 BioJava is an open-source project dedicated to providing a Java framework
 for processing biological data.
 .
 This package contains the HTML documentation describing the API of BioJava
 which was generated automatically by JavaDoc.

libbiojava1.7-java: Java API to biological data and applications (version 1.7)

 This package presents the Open Source Java API to biological databases
 and a series of mostly sequence-based algorithms. The APIs are not
 compatible between versions. In analogy to the dealing with shared
 libraries of the C language, the jar file of this package has the
 API version in its name. It is symbolically linked to the expected
 biojava.jar filename in the package libbiojava-java. This will help
 keeping multiple versions of the biojava API in parallel.