Ubuntu
bowtie2 package

bowtie2 2.3.5.1-5 source package in Ubuntu

Changelog

bowtie2 (2.3.5.1-5) unstable; urgency=medium

  * Team upload.
  * debian/rules: Remove -santized here as well

 -- Michael R. Crusoe <email address hidden>  Wed, 18 Dec 2019 12:15:28 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
science
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
bowtie2_2.3.5.1-5.dsc 2.1 KiB bf115beb8fa9176b6a0d4bc2d7d59a6e58fa5b927e298a70f889a5a707ff180d
bowtie2_2.3.5.1.orig.tar.xz 8.4 MiB 2a96a484c1eac48eb79ff2a88643bc71686b0adfef83e2ecbeac00d7df916e3d
bowtie2_2.3.5.1-5.debian.tar.xz 49.3 KiB 143e2a9357821ed1c9232efd1c9e0d0f02a625b5138a2002ea798e4fead48b3d

Available diffs

No changes file available.

Binary packages built by this source

bowtie2: ultrafast memory-efficient short read aligner

 is an ultrafast and memory-efficient tool for aligning sequencing reads
 to long reference sequences. It is particularly good at aligning reads
 of about 50 up to 100s or 1,000s of characters, and particularly good
 at aligning to relatively long (e.g. mammalian) genomes.
 .
 Bowtie 2 indexes the genome with an FM Index to keep its memory footprint
 small: for the human genome, its memory footprint is typically
 around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes

bowtie2-dbgsym: debug symbols for bowtie2
bowtie2-examples: Examples for bowtie2

 An ultrafast and memory-efficient tool for aligning sequencing reads
 to long reference sequences. It is particularly good at aligning reads
 of about 50 up to 100s or 1,000s of characters, and particularly good
 at aligning to relatively long (e.g. mammalian) genomes.
 .
 Bowtie 2 indexes the genome with an FM Index to keep its memory footprint
 small: for the human genome, its memory footprint is typically
 around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes
 .
 This package provides some example data to work with bowtie2.