cat-bat 5.3-1 source package in Ubuntu


cat-bat (5.3-1) unstable; urgency=medium

  * New upstream version
  * Standards-Version: 4.6.2 (routine-update)
  * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)

 -- Andreas Tille <email address hidden>  Mon, 27 Nov 2023 11:57:19 +0100

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Debian Med
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Debian Med
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File Size SHA-256 Checksum
cat-bat_5.3-1.dsc 1.9 KiB a8cce1347992acbec49b645193e6f149a9960acc2c6c80329589151a99730dea
cat-bat_5.3.orig.tar.gz 38.2 KiB 2893ee18b0d5b24a291edd7d8ca1738d40ea189d18ba0fb7aad3e38973a787e7
cat-bat_5.3-1.debian.tar.xz 4.3 KiB fc19ed6027f4e3fb1219879fdb07669bef3c1482c3abe01c3cebe5bf925bc07f

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Binary packages built by this source

cat-bat: taxonomic classification of contigs and metagenome-assembled genomes (MAGs)

 Contig Annotation Tool (CAT) and Bin Annotation Tool (BAT) are pipelines
 for the taxonomic classification of long DNA sequences and metagenome
 assembled genomes (MAGs/bins) of both known and (highly) unknown
 microorganisms, as generated by contemporary metagenomics studies. The
 core algorithm of both programs involves gene calling, mapping of
 predicted ORFs against the nr protein database, and voting-based
 classification of the entire contig / MAG based on classification of the
 individual ORFs. CAT and BAT can be run from intermediate steps if files
 are formatted appropriately.