Ubuntu
cd-hit package

cd-hit 4.6-2012-04-25-1 source package in Ubuntu

Changelog

cd-hit (4.6-2012-04-25-1) unstable; urgency=low


  * New upstream version incorporating the previous patches as
    well as the LaTeX source of the documentation
  * debian/patches/use-dpkg-buildflags.patch: Make sure hardening
    flags will really propagate
  * debian/{control,rules}: Use mpi version of cd-hit
  * README.Debian: Tell users that we are using mpi and they should
    ask for an alternative if needed
  * debian/*.1, debian/manpages: Deleted in favour of autogenerated
    manpages using help2man; Remark: the manually edited pages were
    slightly better regarding "SEE ALSO" and "AUTHORS" sections but
    it is better to auto-generate the pages to stay with changes of
    future versions
  * debian/rules: Use help2man 2 create manpages whereever possible
  * debian/patches/enable_help2man.patch: Fix some minor issues to
    get less error output in man pages

 -- Andreas Tille <email address hidden>  Thu, 26 Apr 2012 07:54:23 +0200

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
science
Urgency:
Low Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
cd-hit_4.6-2012-04-25-1.dsc 1.4 KiB 1b208589f64b6c177b442509c477055f5e78d900de1d1ec1d33dc3786237486a
cd-hit_4.6-2012-04-25.orig.tar.gz 636.9 KiB aa91e57bba61f04db39e83cdd6c8cdf082a006ea8c4c818b956b7531e4bcc2e9
cd-hit_4.6-2012-04-25-1.debian.tar.gz 5.5 KiB 097cccedaa71c61af377b14c7e9c0055450990c84309c51ee258b68446282765

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Binary packages built by this source

cd-hit: suite of programs designed to quickly group sequences

 cd-hit contains a number of programs designed to quickly group
 sequences. cd-hit groups proteins into clusters that meet a user-defined
 similarity threshold. cd-hit-est is similar to cd-hit, but designed to
 group nucleotide sequences (without introns). cd-hit-est-2d is similar
 to cd-hit-2d but designed to compare two nucleotide datasets. A number
 of other related programs are also in this package. Please see the
 cd-hit user manual, also part of this package, for further information.