density-fitness 1.0.0-4 source package in Ubuntu
Changelog
density-fitness (1.0.0-4) unstable; urgency=medium * Force dependency on right libpdb-redo -- Maarten L. Hekkelman <email address hidden> Wed, 03 Nov 2021 08:01:09 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| density-fitness_1.0.0-4.dsc | 2.2 KiB | 2162cc626532d5bbcca56fddd8d39412e5248784366d69eea023fa3e753ef835 |
| density-fitness_1.0.0.orig.tar.gz | 94.4 KiB | d4c16b9f29881a2257f154fd5ca92d36e5d58da00b99f20105fdb78e8df09b6c |
| density-fitness_1.0.0-4.debian.tar.xz | 3.6 KiB | 36489e16189ef8f32f965bef78767aaf6116ea949198e2032bb4efd11d9532f2 |
Available diffs
- diff from 1.0.0-2 to 1.0.0-4 (772 bytes)
- diff from 1.0.0-3 to 1.0.0-4 (701 bytes)
No changes file available.
Binary packages built by this source
- density-fitness: Calculates per-residue electron density scores
The program density-fitness calculates electron density metrics,
for main- (includes Cβ atom) and side-chain atoms of individual residues.
.
For this calculation, the program uses the structure model in either PDB
or mmCIF format and the electron density from the 2mFo-DFc and mFo-DFc maps.
If these maps are not readily available, the MTZ file and model can be used
to calculate maps clipper. Density-fitness support both X-ray and electron
diffraction data.
.
This program is essentially a reimplementation of edstats, a program
available from the CCP4 suite. However, the output now contains only the
RSR, SRSR and RSCC fields as in edstats with the addition of EDIAm
and OPIA and no longer requires pre-calculated map coefficients.
- density-fitness-dbgsym: debug symbols for density-fitness
