discosnp 1:2.6.1-1 source package in Ubuntu
Changelog
discosnp (1:2.6.1-1) unstable; urgency=medium
* New upstream version
Closes: #1000413
-- Andreas Tille <email address hidden> Sun, 05 Dec 2021 16:34:05 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| discosnp_2.6.1-1.dsc | 2.1 KiB | b8a78c92b8cfb2729eef53e1906fe982956c11a54cfbccb4e53fc922e1cc1121 |
| discosnp_2.6.1.orig.tar.gz | 1.3 MiB | 65afa7f0991561a1f8d012cd580b9b5e2a602e869eab18616c46b1259f1068a7 |
| discosnp_2.6.1-1.debian.tar.xz | 21.6 KiB | d7a80d2fbec36d9ffaeb1cb2bf2996a297d495248fa11b76aef9c6238b89920f |
Available diffs
- diff from 1:2.5.4-1 to 1:2.6.1-1 (57.3 KiB)
No changes file available.
Binary packages built by this source
- discosnp: discovering Single Nucleotide Polymorphism from raw set(s) of reads
Software discoSnp is designed for discovering Single Nucleotide
Polymorphism (SNP) from raw set(s) of reads obtained with Next Generation
Sequencers (NGS).
.
Note that number of input read sets is not constrained, it can be one, two,
or more. Note also that no other data as reference genome or annotations
are needed.
.
The software is composed by two modules. First module, kissnp2, detects SNPs
from read sets. A second module, kissreads, enhance the kissnp2 results by
computing per read set and for each found SNP:
.
1) its mean read coverage
2) the (phred) quality of reads generating the polymorphism.
.
This program is superseded by DiscoSnp++.
- discosnp-dbgsym: debug symbols for discosnp
