Changelog
exonerate (2.0.0-1) unstable; urgency=low
[ David Paleino ]
* Updated to Standards-Version 3.8.0 (no changes needed)
[ Charles Plessy ]
* New upstream release (Closes: #479323)
Quoting the upstream changelog:
o Modified exonerate to work in Client:Server mode
o Fixed --refine to work with SDP alignments
o Disabled codegen warnings from bootstrapper during compilation
o Added --geneticcode option for using alternative genetic codes
o Added --splice5 and --splice3 to allow alternative splice site PSSMs
o Fixed several bugs when scanning query sequences (eg. --forcescan query)
o Fixed to report query on forward strand whenever possible.
o Fixed --ryo sequence dumping with --bestn
o Fixed a bug with missing seeds when using --annotation
o Changed license to GPLv3
o Added protein2dna:bestfit and protein2genome:bestfit models
(works with exhaustive alignment only)
* Updated my email address.
* debian/control:
- Building on glib-2.0 instead of 1.2.
- Added a build dependancy on libreadline5-dev.
- Augmented the long description and changed the short.
- Added a build dependency on CDBS.
* debian/copyright made machine-readable.
* debian/rules switched to cdbs.
* debian/dirs: removed.
-- Ubuntu Archive Auto-Sync <email address hidden> Fri, 04 Jul 2008 08:43:54 +0100
