fasta3 36.3.8g-1 source package in Ubuntu

Changelog

fasta3 (36.3.8g-1) unstable; urgency=low

  [ Andreas Tille ]
  * Moved packaging from SVN to Git

  [ Steffen Moeller]
  * Initial release (Closes: #895740)

  * New upstream version.
  * Fixed remaining lintian error.
  * Bumped policy to 4.1.4.

  [ Alexandre Mestiashvili]
  * Add zlib1g-dev to Build-Depends
  * Apply cme fix dpkg, fixing indentation, secure url and patch descriptions

 -- Steffen Moeller <email address hidden>  Sun, 15 Apr 2018 16:08:39 +0200

Upload details

Uploaded by:
Debian Med on 2018-05-30
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Low Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Eoan release on 2019-04-18 multiverse misc
Disco release on 2018-10-30 multiverse misc
Cosmic release on 2018-05-31 multiverse misc

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File Size SHA-256 Checksum
fasta3_36.3.8g-1.dsc 1.9 KiB e3accf0733d0c504b12922036ae936439dce5b1946f202ca337c5758f5fc1986
fasta3_36.3.8g.orig.tar.gz 1.2 MiB 102ee6bc9406d7b13a69eeb16c67c30258a146807a5363d8dab867c45f2e0725
fasta3_36.3.8g-1.debian.tar.xz 4.5 KiB 577383585f84dedf2ea20502b2998c31d6719884e3a1d8b354b3b95357481c24

No changes file available.

Binary packages built by this source

fasta3: tools for searching collections of biological sequences

 The FASTA programs find regions of local or global similarity between
 Protein or DNA sequences, either by searching Protein or DNA databases,
 or by identifying local duplications within a sequence. Other
 programs provide information on the statistical significance of an
 alignment. Like BLAST, FASTA can be used to infer functional and
 evolutionary relationships between sequences as well as help identify
 members of gene families.
 .
  * Protein
 .
  - Protein-protein FASTA
  - Protein-protein Smith-Waterman (ssearch)
  - Global Protein-protein (Needleman-Wunsch) (ggsearch)
  - Global/Local protein-protein (glsearch)
  - Protein-protein with unordered peptides (fasts)
  - Protein-protein with mixed peptide sequences (fastf)
 .
  * Nucleotide
 .
  - Nucleotide-Nucleotide (DNA/RNA fasta)
  - Ordered Nucleotides vs Nucleotide (fastm)
  - Un-ordered Nucleotides vs Nucleotide (fasts)
 .
  * Translated
 .
  - Translated DNA (with frameshifts, e.g. ESTs)
    vs Proteins (fastx/fasty)
  - Protein vs Translated DNA (with frameshifts)
    (tfastx/tfasty)
  - Peptides vs Translated DNA (tfasts)
 .
  * Statistical Significance
 .
  - Protein vs Protein shuffle (prss)
  - DNA vs DNA shuffle (prss)
  - Translated DNA vs Protein shuffle (prfx)
 .
  * Local Duplications
 .
  - Local Protein alignments (lalign)
  - Plot Protein alignment "dot-plot" (plalign)
  - Local DNA alignments (lalign)
  - Plot DNA alignment "dot-plot" (plalign)

fasta3-dbgsym: debug symbols for fasta3
fasta3-doc: user guide for FASTA tools

 The FASTA programs find regions of local or global similarity between
 Protein or DNA sequences, either by searching Protein or DNA databases,
 or by identifying local duplications within a sequence. Other
 programs provide information on the statistical significance of an
 alignment. Like BLAST, FASTA can be used to infer functional and
 evolutionary relationships between sequences as well as help identify
 members of gene families.
 .
 The use of the package's many binaries and the equally representated
 conceptual approaches towards sequence analyses are summarised in
 this PDF.