Ubuntu
gbrowse package

gbrowse 2.56+dfsg-4build1 source package in Ubuntu

Changelog

gbrowse (2.56+dfsg-4build1) focal; urgency=medium

  * No-change rebuild for the perl update.

 -- Matthias Klose <email address hidden>  Sat, 19 Oct 2019 10:37:25 +0000

Upload details

Uploaded by:
Matthias Klose
Uploaded to:
Focal
Original maintainer:
Debian Med
Architectures:
any all
Section:
science
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
gbrowse_2.56+dfsg.orig.tar.gz 4.2 MiB f6da1ff315b17ec260810cf439a54ae7ddd66728015be03f7fbb6ba795676f81
gbrowse_2.56+dfsg-4build1.debian.tar.xz 23.1 KiB 6ba2bd2b3694fdbfc1718526414352c80a3a2c513fa84f62a796b487323e9e98
gbrowse_2.56+dfsg-4build1.dsc 2.6 KiB 9be53fd2b903a0f369474f4aa8a5012d790b8a7117b10fc5b2d361a5f3894466

View changes file

Binary packages built by this source

gbrowse: GMOD Generic Genome Browser

 Generic Genome Browser is a simple but highly
 configurable web-based genome browser. It is a component of the
 Generic Model Organism Systems Database project (GMOD).
 Some of its features:
  * Simultaneous bird's eye and detailed views of the genome;
  * Scroll, zoom, center;
  * Attach arbitrary URLs to any annotation;
  * Order and appearance of tracks are customizable by administrator and
    end-user;
  * Search by annotation ID, name, or comment;
  * Supports third party annotation using GFF formats;
  * Settings persist across sessions;
  * DNA and GFF dumps;
  * Connectivity to different databases, including BioSQL and Chado;
  * Multi-language support;
  * Third-party feature loading;
  * Customizable plug-in architecture (e.g. run BLAST, dump & import many
    formats, find oligonucleotides, design primers, create restriction maps,
    edit features).

gbrowse-calign: CAlign helper

 Generic Genome Browser is a simple but highly
 configurable web-based genome browser. It is a component of the
 Generic Model Organism Systems Database project (GMOD).
 .
 This package provides the CAlign helper
 for use with Realign. It speeds up Smith-Waterman alignment.

gbrowse-calign-dbgsym: debug symbols for gbrowse-calign
gbrowse-data: Sample data to use GBrowse

 Generic Genome Browser is a simple but highly
 configurable web-based genome browser. It is a component of the
 Generic Model Organism Systems Database project (GMOD).
 .
 This package contains sample data to test the gbrowse tool
 with the Yeast genome.