Ubuntu
gbrowse package

gbrowse 2.56+dfsg-9 source package in Ubuntu

Changelog

gbrowse (2.56+dfsg-9) unstable; urgency=medium

  * Fix watchfile to detect new versions on github
  * Standards-Version: 4.6.0 (routine-update)
  * debhelper-compat 13 (routine-update)
  * Add salsa-ci file (routine-update)
  * Rules-Requires-Root: no (routine-update)
  * Apply multi-arch hints.
    + gbrowse-calign: Add Multi-Arch: same.
  * Remove duplicate entry in copyright file

 -- Andreas Tille <email address hidden>  Wed, 13 Oct 2021 09:46:03 +0200

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
science
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
gbrowse_2.56+dfsg-9.dsc 2.6 KiB 0a4a0e7bc26e2ed22bf3a92ab900d5409440d51c0d424132609911c25c1d06fb
gbrowse_2.56+dfsg.orig.tar.gz 4.2 MiB f6da1ff315b17ec260810cf439a54ae7ddd66728015be03f7fbb6ba795676f81
gbrowse_2.56+dfsg-9.debian.tar.xz 23.1 KiB 281ecc604c74fd8122b2385cfefa9ef280e29d7f8ed909895f09dc60fcca3c8d

No changes file available.

Binary packages built by this source

gbrowse: GMOD Generic Genome Browser

 Generic Genome Browser is a simple but highly
 configurable web-based genome browser. It is a component of the
 Generic Model Organism Systems Database project (GMOD).
 Some of its features:
  * Simultaneous bird's eye and detailed views of the genome;
  * Scroll, zoom, center;
  * Attach arbitrary URLs to any annotation;
  * Order and appearance of tracks are customizable by administrator and
    end-user;
  * Search by annotation ID, name, or comment;
  * Supports third party annotation using GFF formats;
  * Settings persist across sessions;
  * DNA and GFF dumps;
  * Connectivity to different databases, including BioSQL and Chado;
  * Multi-language support;
  * Third-party feature loading;
  * Customizable plug-in architecture (e.g. run BLAST, dump & import many
    formats, find oligonucleotides, design primers, create restriction maps,
    edit features).

gbrowse-calign: CAlign helper

 Generic Genome Browser is a simple but highly
 configurable web-based genome browser. It is a component of the
 Generic Model Organism Systems Database project (GMOD).
 .
 This package provides the CAlign helper
 for use with Realign. It speeds up Smith-Waterman alignment.

gbrowse-calign-dbgsym: debug symbols for gbrowse-calign
gbrowse-data: Sample data to use GBrowse

 Generic Genome Browser is a simple but highly
 configurable web-based genome browser. It is a component of the
 Generic Model Organism Systems Database project (GMOD).
 .
 This package contains sample data to test the gbrowse tool
 with the Yeast genome.