ggd-utils 1.0.0+ds-1build1 source package in Ubuntu
Changelog
ggd-utils (1.0.0+ds-1build1) mantic; urgency=medium * No-change rebuild with Go 1.21. -- Michael Hudson-Doyle <email address hidden> Thu, 24 Aug 2023 17:14:05 +1200
Upload details
- Uploaded by:
- Michael Hudson-Doyle
- Uploaded to:
- Mantic
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Noble | release | universe | misc | |
| Mantic | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| ggd-utils_1.0.0+ds.orig.tar.xz | 29.8 KiB | f016ab63fd567ff71d84fd946163556a197fc03d2931b013b5d2b78b8a317d2e |
| ggd-utils_1.0.0+ds-1build1.debian.tar.xz | 4.2 KiB | 3e959821ae45687c53315e8d1e16fc2e809c1c7d32659631424d7b9c760c36fe |
| ggd-utils_1.0.0+ds-1build1.dsc | 2.3 KiB | 114852266b7efce765a75f97d99b87cbd4c4e79f855423237ee4d9388e98681c |
Available diffs
Binary packages built by this source
- ggd-utils: programs for use in ggd
Takes a genome file and (currently) a .vcf.gz or
a .bed.gz and checks that:
.
* a .tbi is present
* the VCF has ""##fileformat=VCF" as the first
line
* the VCF has a #CHROM header
* the chromosome are in the order specified by
the genome file (and present)
* the positions are sorted
* the positions are <= the chromosome lengths
defined in the genome file.
.
As a result, any new genome going into GGD will have
a .genome file that will dictate the sort order
and presence or absence of the 'chr' prefix for chromosomes
- ggd-utils-dbgsym: debug symbols for ggd-utils
- golang-github-gogetdata-ggd-utils-dev: library for use in ggd
Takes a genome file and (currently) a .vcf.gz or
a .bed.gz and checks that:
.
* a .tbi is present
* the VCF has ""##fileformat=VCF" as the first
line
* the VCF has a #CHROM header
* the chromosome are in the order specified by
the genome file (and present)
* the positions are sorted
* the positions are <= the chromosome lengths
defined in the genome file.
.
As a result, any new genome going into GGD will have
a .genome file that will dictate the sort order
and presence or absence of the 'chr' prefix for chromosomes
.
This is the library package for ggd-utils
