ggd-utils 1.0.0+ds-1ubuntu0.23.10.1 source package in Ubuntu
Changelog
ggd-utils (1.0.0+ds-1ubuntu0.23.10.1) mantic-security; urgency=medium * No change rebuild due to golang-1.20, golang-1.21 updates -- Nishit Majithia <email address hidden> Fri, 19 Jan 2024 11:35:14 +0530
Upload details
- Uploaded by:
- Nishit Majithia
- Uploaded to:
- Mantic
- Original maintainer:
- Ubuntu Developers
- Architectures:
- any all
- Section:
- science
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Mantic | updates | universe | misc | |
| Mantic | security | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| ggd-utils_1.0.0+ds.orig.tar.xz | 29.8 KiB | f016ab63fd567ff71d84fd946163556a197fc03d2931b013b5d2b78b8a317d2e |
| ggd-utils_1.0.0+ds-1ubuntu0.23.10.1.debian.tar.xz | 4.3 KiB | 491f828bf7a25b1479402c9d75e1cfaba4898f11c915d58956263e2d63591035 |
| ggd-utils_1.0.0+ds-1ubuntu0.23.10.1.dsc | 2.3 KiB | c989dd35f4f60f3db54935b6c8824aff984047042c7abc42873a85d3198c2643 |
Available diffs
Binary packages built by this source
- ggd-utils: programs for use in ggd
Takes a genome file and (currently) a .vcf.gz or
a .bed.gz and checks that:
.
* a .tbi is present
* the VCF has ""##fileformat=VCF" as the first
line
* the VCF has a #CHROM header
* the chromosome are in the order specified by
the genome file (and present)
* the positions are sorted
* the positions are <= the chromosome lengths
defined in the genome file.
.
As a result, any new genome going into GGD will have
a .genome file that will dictate the sort order
and presence or absence of the 'chr' prefix for chromosomes
- ggd-utils-dbgsym: debug symbols for ggd-utils
- golang-github-gogetdata-ggd-utils-dev: library for use in ggd
Takes a genome file and (currently) a .vcf.gz or
a .bed.gz and checks that:
.
* a .tbi is present
* the VCF has ""##fileformat=VCF" as the first
line
* the VCF has a #CHROM header
* the chromosome are in the order specified by
the genome file (and present)
* the positions are sorted
* the positions are <= the chromosome lengths
defined in the genome file.
.
As a result, any new genome going into GGD will have
a .genome file that will dictate the sort order
and presence or absence of the 'chr' prefix for chromosomes
.
This is the library package for ggd-utils
