gmap 2015-09-29-2 source package in Ubuntu
Changelog
gmap (2015-09-29-2) unstable; urgency=medium * Build with zlib and bzlib support ( adds --gunzip --bunzip2 options ) -- Alexandre Mestiashvili <email address hidden> Thu, 15 Oct 2015 14:39:07 +0200
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- science
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| gmap_2015-09-29-2.dsc | 2.0 KiB | dbfb4f374df6a4bff49cb8b068c9cdb379f8e1d807cf1dadd44151ea7333d60c |
| gmap_2015-09-29.orig.tar.gz | 4.0 MiB | f3a5c3fe405a2347f66fda2c4258f882c41ec3cf87200ca3da904f5b782235f0 |
| gmap_2015-09-29-2.debian.tar.xz | 6.6 KiB | 18ef87a95b71621ac7b47e3e3a8dcb74ab3d0b89526565f6aad3fb877205c5f4 |
Available diffs
- diff from 2015-07-23-1 to 2015-09-29-2 (49.5 KiB)
No changes file available.
Binary packages built by this source
- gmap: spliced and SNP-tolerant alignment for mRNA and short reads
This package contains the programs GMAP and GSNAP as well as
utilities to manage genome databases in GMAP/GSNAP format.
GMAP (Genomic Mapping and Alignment Program) is a tool for aligning
EST, mRNA and cDNA sequences.
GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for
aligning single-end and paired-end transcriptome reads.
Both tools can use a database of
* known splice sites and identify novel splice sites.
* known single-nucleotide polymorphisms (SNPs).
GSNAP can align bisulfite-treated DNA.
- gmap-dbgsym: debug symbols for package gmap
This package contains the programs GMAP and GSNAP as well as
utilities to manage genome databases in GMAP/GSNAP format.
GMAP (Genomic Mapping and Alignment Program) is a tool for aligning
EST, mRNA and cDNA sequences.
GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for
aligning single-end and paired-end transcriptome reads.
Both tools can use a database of
* known splice sites and identify novel splice sites.
* known single-nucleotide polymorphisms (SNPs).
GSNAP can align bisulfite-treated DNA.
