gmap 2015-12-31.v5-1 source package in Ubuntu
Changelog
gmap (2015-12-31.v5-1) unstable; urgency=medium * Imported Upstream version 2015-12-31.v5 -- Alexandre Mestiashvili <email address hidden> Tue, 19 Jan 2016 13:15:06 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- science
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| gmap_2015-12-31.v5-1.dsc | 2.0 KiB | e7bf80b07542ed0ac48e6c150c7327cba1a8d5bf683ff8110bb14667b434aa32 |
| gmap_2015-12-31.v5.orig.tar.gz | 4.0 MiB | 2317ba63578ba87f534689c0bf6930a9b177df4aa8a75b2a82f2118760ff3037 |
| gmap_2015-12-31.v5-1.debian.tar.xz | 6.7 KiB | 3f9eb5f922f3d7ab6186b4bb9659c95f47e96fadfe74404932fbcc379fff5073 |
Available diffs
- diff from 2015-12-31.v4-1 to 2015-12-31.v5-1 (816 bytes)
No changes file available.
Binary packages built by this source
- gmap: spliced and SNP-tolerant alignment for mRNA and short reads
This package contains the programs GMAP and GSNAP as well as
utilities to manage genome databases in GMAP/GSNAP format.
GMAP (Genomic Mapping and Alignment Program) is a tool for aligning
EST, mRNA and cDNA sequences.
GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for
aligning single-end and paired-end transcriptome reads.
Both tools can use a database of
* known splice sites and identify novel splice sites.
* known single-nucleotide polymorphisms (SNPs).
GSNAP can align bisulfite-treated DNA.
- gmap-dbgsym: debug symbols for package gmap
This package contains the programs GMAP and GSNAP as well as
utilities to manage genome databases in GMAP/GSNAP format.
GMAP (Genomic Mapping and Alignment Program) is a tool for aligning
EST, mRNA and cDNA sequences.
GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for
aligning single-end and paired-end transcriptome reads.
Both tools can use a database of
* known splice sites and identify novel splice sites.
* known single-nucleotide polymorphisms (SNPs).
GSNAP can align bisulfite-treated DNA.
