The only explanation that comes to mind for what you describe above would be a GRUB upgrade that made wrong assumptions about which OS resides on what drive.
In any case, I cannot see how upgrade-system would have caused this, since it's only an APT front-end.
The only explanation that comes to mind for what you describe above would be a GRUB upgrade that made wrong assumptions about which OS resides on what drive.
In any case, I cannot see how upgrade-system would have caused this, since it's only an APT front-end.