gubbins 2.2.0-1 source package in Ubuntu


gubbins (2.2.0-1) unstable; urgency=medium

  * Team upload.
  * New upstream release.

 -- Sascha Steinbiss <email address hidden>  Thu, 03 Nov 2016 15:25:15 +0100

Upload details

Uploaded by:
Debian Med on 2016-11-03
Uploaded to:
Original maintainer:
Debian Med
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Artful release on 2017-04-20 universe misc
Zesty release on 2016-11-04 universe misc


File Size SHA-256 Checksum
gubbins_2.2.0-1.dsc 2.1 KiB 1fbd76fadc8e7aa952bdac58ecd1bb04740ef1285ba275e0a8773acb7774afd6
gubbins_2.2.0.orig.tar.gz 314.3 KiB 245bc70d05b9f0f3ea10e6a20203ac049d1b912c1af8cf9b90763fd38e148cb2
gubbins_2.2.0-1.debian.tar.xz 5.9 KiB a1b8d8fe50723594ee5ea9cb95dc791ebf33d916d67cb120779214977930c529

Available diffs

No changes file available.

Binary packages built by this source

gubbins: phylogenetic analysis of genome sequences

 Gubbins supports rapid phylogenetic analysis of large samples of
 recombinant bacterial whole genome sequences.
 Gubbins (Genealogies Unbiased By recomBinations In Nucleotide
 Sequences) is an algorithm that iteratively identifies loci containing
 elevated densities of base substitutions while concurrently constructing
 a phylogeny based on the putative point mutations outside of these
 regions. Simulations demonstrate the algorithm generates highly accurate
 reconstructions under realistic models of short-term bacterial
 evolution, and can be run in only a few hours on alignments of hundreds
 of bacterial genome sequences.

gubbins-dbgsym: debug symbols for gubbins