gubbins 3.3.3-1 source package in Ubuntu
Changelog
gubbins (3.3.3-1) unstable; urgency=medium * New upstream version * iqtree2.patch: unfuzz. * autoupdate_configure.ac.patch: forwarding not needed. -- Étienne Mollier <email address hidden> Sun, 04 Feb 2024 17:45:59 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Oracular | release | universe | misc | |
| Noble | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| gubbins_3.3.3-1.dsc | 2.4 KiB | feea03cdcde2f4f20a1a50e762ce8711be99acf16f34215be6a9517c08f2d053 |
| gubbins_3.3.3.orig.tar.gz | 2.7 MiB | b1d878130a6f07ff133efa55f0d6ed2ec3bcfa64029352ce5050c6a162b9a0b2 |
| gubbins_3.3.3-1.debian.tar.xz | 7.4 KiB | 3dc983118e6c6da1e042dfcac905e2d7f1165d9ab2908bf296dfb5f792605f68 |
Available diffs
- diff from 3.3.1-1 to 3.3.3-1 (4.7 KiB)
No changes file available.
Binary packages built by this source
- gubbins: phylogenetic analysis of genome sequences
Gubbins supports rapid phylogenetic analysis of large samples of
recombinant bacterial whole genome sequences.
.
Gubbins (Genealogies Unbiased By recomBinations In Nucleotide
Sequences) is an algorithm that iteratively identifies loci containing
elevated densities of base substitutions while concurrently constructing
a phylogeny based on the putative point mutations outside of these
regions. Simulations demonstrate the algorithm generates highly accurate
reconstructions under realistic models of short-term bacterial
evolution, and can be run in only a few hours on alignments of hundreds
of bacterial genome sequences.
- gubbins-dbgsym: debug symbols for gubbins
