Ubuntu
hmmer2 package

hmmer2 2.3.2-6 source package in Ubuntu

Changelog

hmmer2 (2.3.2-6) unstable; urgency=low


  [Charles Plessy]
  * Enabled upstream checks in debian/rules.
  * Documented how the package is tested in debian/README.Debian
  * Switched Debhelper to mode 7 (debian/compat, debian/control).
  * Gathered some metadata about upstream in debian/upstream-metadata.yaml.
  * Checked conformance with Policy 3.8.3 and incremented Standards-Version
    in debian/control to reflect it.

  [Laszlo Kajan]
  * Debhelper 8.
  * Policy version 3.9.3.
  * Renaming hmmer version 2 to hmmer2 in order to allow coexistence with
    hmmer (>=3) in wheezy.
  * Renaming binaries and man pages:

     hmmalign     => hmm2align    
     hmmbuild     => hmm2build    
     hmmcalibrate => hmm2calibrate
     hmmconvert   => hmm2convert  
     hmmemit      => hmm2emit     
     hmmfetch     => hmm2fetch    
     hmmindex     => hmm2index    
     hmmpfam      => hmm2pfam     
     hmmsearch    => hmm2search   
     
     hmmcalibrate-pvm => hmm2calibrate-pvm
     hmmpfam-pvm      => hmm2pfam-pvm
     hmmsearch-pvm    => hmm2search-pvm

    in order to allow coexistence with those from hmmer (>=3).
    (Closes: #680539)
  * debian/rules: remove binary without source documentation
    Userguide.pdf in get-orig-source target

 -- Laszlo Kajan <email address hidden>  Mon, 09 Jul 2012 17:46:31 +0200

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Low Urgency

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Downloads

File Size SHA-256 Checksum
hmmer2_2.3.2-6.dsc 1.5 KiB f6bae144a0763046002f47de67d6302d8dd4e76a4d1d47e20df63c76632e5e19
hmmer2_2.3.2.orig.tar.xz 469.1 KiB 8b2e14347497b12a36bb8ed446b91e320ea7fd73da31093e5143b6126c713681
hmmer2_2.3.2-6.debian.tar.gz 10.1 KiB 84aac8603949a4e558dc0fd7e82b0345fab5f0142e3fc4d5f5b3160595b17577

No changes file available.

Binary packages built by this source

hmmer2: profile hidden Markov models for protein sequence analysis

 HMMER is an implementation of profile hidden Markov model methods for
 sensitive searches of biological sequence databases using multiple sequence
 alignments as queries.
 .
 Given a multiple sequence alignment as input, HMMER builds a statistical
 model called a "hidden Markov model" which can then be used as a query into
 a sequence database to find (and/or align) additional homologues of the
 sequence family.

hmmer2-doc: No summary available for hmmer2-doc in ubuntu saucy.

No description available for hmmer2-doc in ubuntu saucy.

hmmer2-pvm: No summary available for hmmer2-pvm in ubuntu raring.

No description available for hmmer2-pvm in ubuntu raring.