idba 1.1.3-5 source package in Ubuntu
Changelog
idba (1.1.3-5) unstable; urgency=medium
[ Jelmer Vernooij ]
* Use secure copyright file specification URI.
* Trim trailing whitespace.
[ Andreas Tille ]
* Run build time test
* Use 2to3 to port Python2 to Python3 scripts
Closes: #945684
* debhelper-compat 12
* Standards-Version: 4.4.1
* Set upstream metadata fields: Bug-Submit, Repository, Repository-
Browse.
-- Andreas Tille <email address hidden> Thu, 28 Nov 2019 12:08:11 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| idba_1.1.3-5.dsc | 1.9 KiB | 0d65b0096ef5759441d984b9ee728716120adb236bff1f52b90d86722a5b14ba |
| idba_1.1.3.orig.tar.gz | 435.8 KiB | 030e24463c6d725c1c202baabf773b605b51e310844fd0f27f4688ecfbae26d0 |
| idba_1.1.3-5.debian.tar.xz | 7.2 KiB | 8f92bce7ecf4a417d7dad12d1a9f58f52b0d683d4170c9508406735c4da53069 |
Available diffs
- diff from 1.1.3-3 to 1.1.3-5 (3.6 KiB)
No changes file available.
Binary packages built by this source
- idba: iterative De Bruijn Graph short read assemblers
IDBA stands for iterative de Bruijn graph assembler. In computational
sequence biology, an assembler solves the puzzle coming from large
sequencing machines that feature many gigabytes of short reads from a
large genome.
.
This package provides several flavours of the IDBA assembler, as they all
share the same source tree but serve different purposes and evolved over time.
.
IDBA is the basic iterative de Bruijn graph assembler for
second-generation sequencing reads. IDBA-UD, an extension of IDBA,
is designed to utilize paired-end reads to assemble low-depth regions
and use progressive depth on contigs to reduce errors in high-depth
regions. It is a generic purpose assembler and especially good for
single-cell and metagenomic sequencing data. IDBA-Hybrid is another
update version of IDBA-UD, which can make use of a similar reference
genome to improve assembly result. IDBA-Tran is an iterative de Bruijn
graph assembler for RNA-Seq data.
- idba-dbgsym: debug symbols for idba
