Ubuntu
khmer package

khmer 3.0.0~a3+dfsg-5ubuntu3 source package in Ubuntu

Changelog

khmer (3.0.0~a3+dfsg-5ubuntu3) noble; urgency=medium

  * Ensure that the scripts properly close files that they open for writing.
    Python 3.12 seems to be less forgiving and oftentimes, files end up
    truncated.
  * Ensure importlib is used instead of imp, which was dropped from Python
    3.12.

 -- Olivier Gayot <email address hidden>  Sun, 26 Nov 2023 02:28:32 +0100

Upload details

Uploaded by:
Olivier Gayot
Sponsored by:
Simon Quigley
Uploaded to:
Noble
Original maintainer:
Ubuntu Developers
Architectures:
all amd64
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Builds

Noble: [FULLYBUILT] amd64

Downloads

File Size SHA-256 Checksum
khmer_3.0.0~a3+dfsg.orig.tar.xz 15.0 MiB c21d652ac412e641f568cdc300952d53620bb4902a9179c8267ea0030b799f75
khmer_3.0.0~a3+dfsg-5ubuntu3.debian.tar.xz 25.3 KiB 5d7564abedd158298356207f1806580d0662fa9aeef1221ae1a6e43c212d7999
khmer_3.0.0~a3+dfsg-5ubuntu3.dsc 2.6 KiB b6cd267663ed16ac32dc615792521642ea518b07a9ab221f3bef86ee1ca9af12

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Binary packages built by this source

khmer: in-memory DNA sequence kmer counting, filtering & graph traversal

 khmer is a library and suite of command line tools for working with DNA
 sequence. It is primarily aimed at short-read sequencing data such as that
 produced by the Illumina platform. khmer takes a k-mer-centric approach to
 sequence analysis, hence the name.

khmer-common: common files for the khmer project tools

 khmer is a library and suite of command line tools for working with DNA
 sequence. It is primarily aimed at short-read sequencing data such as
 that produced by the Illumina platform. khmer takes a k-mer-centric
 approach to sequence analysis, hence the name.
 .
 This package contains common files for liboxli and khmer

khmer-dbgsym: debug symbols for khmer
liboxli-dev: in-memory DNA sequence analysis dev library

 khmer is a library and suite of command line tools for working with DNA
 sequence. It is primarily aimed at short-read sequencing data such as that
 produced by the Illumina platform. khmer takes a k-mer-centric approach to
 sequence analysis, hence the name.
 .
 This package contains the low-level C++ library headers and static archive.

liboxli1: in-memory DNA sequence analysis library from the khmer project

 khmer is a library and suite of command line tools for working with DNA
 sequence. It is primarily aimed at short-read sequencing data such as that
 produced by the Illumina platform. khmer takes a k-mer-centric approach to
 sequence analysis, hence the name.
 .
 This package contains the low-level C++ library.

liboxli1-dbgsym: debug symbols for liboxli1