Ubuntu
libseqlib package

libseqlib 1.1.2+dfsg-4 source package in Ubuntu

Changelog

libseqlib (1.1.2+dfsg-4) unstable; urgency=medium

  * Adapt symbols to new version of gcc
    Closes: #925759
  * debhelper-compat 12
  * Standards-Version: 4.4.0
  * libseqlib-dev: Depends: libssw-dev
  * Add lintian-overrides for libraries not found by pkgconfig

 -- Andreas Tille <email address hidden>  Tue, 20 Aug 2019 15:52:14 +0200

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Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

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File Size SHA-256 Checksum
libseqlib_1.1.2+dfsg-4.dsc 2.2 KiB e7d674c0827191475985593e918c85ec1567325a7830cec5764d0d5edc1c910b
libseqlib_1.1.2+dfsg.orig.tar.xz 153.7 KiB fda571050683e015dba119d6946b41287107a210166c9b4575ed5fba3070500e
libseqlib_1.1.2+dfsg-4.debian.tar.xz 11.5 KiB 4577ed33e3271f6af1fbf96fec25d661569ee63bd01d7dbf0fa82769e9064eb1

Available diffs

No changes file available.

Binary packages built by this source

libseqlib-dev: C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev)

 C++ API and command line tool that provides a rapid and user-friendly
 interface to BAM/SAM/CRAM files, global sequence alignment operations
 and sequence assembly. Four C libraries perform core operations in
 SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
 and Fermi for error correction and sequence assembly. Benchmarking
 indicates that SeqLib has lower CPU and memory requirements than leading
 C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
 and assemble reads from a CRAM file and then align with BWA-MEM.
 SeqLib also provides additional capabilities, including chromosome-aware
 interval queries and read plotting. Command line tools are available for
 performing integrated error correction, micro-assemblies and alignment.
 .
 This package contains the header files and static library.

libseqlib1: C++ htslib/bwa-mem/fermi interface for interrogating sequence data

 C++ API and command line tool that provides a rapid and user-friendly
 interface to BAM/SAM/CRAM files, global sequence alignment operations
 and sequence assembly. Four C libraries perform core operations in
 SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
 and Fermi for error correction and sequence assembly. Benchmarking
 indicates that SeqLib has lower CPU and memory requirements than leading
 C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
 and assemble reads from a CRAM file and then align with BWA-MEM.
 SeqLib also provides additional capabilities, including chromosome-aware
 interval queries and read plotting. Command line tools are available for
 performing integrated error correction, micro-assemblies and alignment.

libseqlib1-dbgsym: No summary available for libseqlib1-dbgsym in ubuntu eoan.

No description available for libseqlib1-dbgsym in ubuntu eoan.