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libseqlib package

libseqlib 1.2.0+dfsg-11build1 source package in Ubuntu

Changelog

libseqlib (1.2.0+dfsg-11build1) noble; urgency=high

  * No change rebuild against libhts3t64.

 -- Julian Andres Klode <email address hidden>  Fri, 22 Mar 2024 17:38:17 +0100

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Uploaded by:
Julian Andres Klode
Uploaded to:
Noble
Original maintainer:
Ubuntu Developers
Architectures:
any
Section:
misc
Urgency:
Very Urgent

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File Size SHA-256 Checksum
libseqlib_1.2.0+dfsg.orig.tar.xz 145.5 KiB 408ee92e5041ff45d9d259d1507ef783e74c565d02e0c623ef0a67a7c387b953
libseqlib_1.2.0+dfsg-11build1.debian.tar.xz 15.2 KiB 3d6e1c45f5e4b1f9efd25ec5752f2892a4cf4747ec53e3e7a6e81e3bf56243b7
libseqlib_1.2.0+dfsg-11build1.dsc 2.3 KiB 2fdd327f25ba91ce4781c0bfdc70619263123d7b56644fc3fec827f160a14066

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Binary packages built by this source

libseqlib-dev: C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev)

 C++ API and command line tool that provides a rapid and user-friendly
 interface to BAM/SAM/CRAM files, global sequence alignment operations
 and sequence assembly. Four C libraries perform core operations in
 SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
 and Fermi for error correction and sequence assembly. Benchmarking
 indicates that SeqLib has lower CPU and memory requirements than leading
 C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
 and assemble reads from a CRAM file and then align with BWA-MEM.
 SeqLib also provides additional capabilities, including chromosome-aware
 interval queries and read plotting. Command line tools are available for
 performing integrated error correction, micro-assemblies and alignment.
 .
 This package contains the header files and static library.

libseqlib2: C++ htslib/bwa-mem/fermi interface for interrogating sequence data

 C++ API and command line tool that provides a rapid and user-friendly
 interface to BAM/SAM/CRAM files, global sequence alignment operations
 and sequence assembly. Four C libraries perform core operations in
 SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
 and Fermi for error correction and sequence assembly. Benchmarking
 indicates that SeqLib has lower CPU and memory requirements than leading
 C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
 and assemble reads from a CRAM file and then align with BWA-MEM.
 SeqLib also provides additional capabilities, including chromosome-aware
 interval queries and read plotting. Command line tools are available for
 performing integrated error correction, micro-assemblies and alignment.

libseqlib2-dbgsym: debug symbols for libseqlib2