libtfbs-perl 0.6.1+dfsg-1build1 source package in Ubuntu
Changelog
libtfbs-perl (0.6.1+dfsg-1build1) utopic; urgency=medium * No change rebuild. -- Matthias Klose <email address hidden> Fri, 22 Aug 2014 10:00:42 +0200
Upload details
- Uploaded by:
- Matthias Klose
- Uploaded to:
- Utopic
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- perl
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section |
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Downloads
File | Size | SHA-256 Checksum |
---|---|---|
libtfbs-perl_0.6.1+dfsg.orig.tar.xz | 159.3 KiB | 7bbbfd6fcea6aff65c2658539afc8562401c368c38cf5f5db946dd39ad8a641b |
libtfbs-perl_0.6.1+dfsg-1build1.debian.tar.xz | 4.5 KiB | ac81a382965fcfaf637e5572a79690a0bb580aec18470700e2ad79e56a21b790 |
libtfbs-perl_0.6.1+dfsg-1build1.dsc | 1.5 KiB | dd16cb57219229562e5c1dd53b161da9ed81c986cc356e44b1c9aa8f6d250f3c |
Available diffs
Binary packages built by this source
- libtfbs-perl: scanning DNA sequence with a position weight matrix
The TFBS perl modules comprise a set of routines to interact with the
Transfac and Jaspar databases that describe a special family of proteins,
the transcription factors. These bind to genomic DNA to initiate (or
prevent) the readout of a gene. Once multiple binding sites are known
for a transcription factor, these are gathered in a single file and are
aligned in order to find position-specific characteristica that might
be used to predict such binding events in novel DNA sequences.
.
If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002)
TFBS: Computational framework for transcription factor binding site analysis.
Bioinformatics 18:1135-1136".