macs 2.1.0.20150731-1 source package in Ubuntu
Changelog
macs (2.1.0.20150731-1) unstable; urgency=low
* debian/watch: now released via PyPI.
* debian/rules:
- 2.1.0 uses a single binary with subcommands, manpages have been updated
- use pybuild
* debian/control:
- `cme fix dpkg-control` reformating
- added myself to uploaders
- upgrades to standards-version 3.9.6,dropped deprecated DM-Upload-Allowed
- now managed via git; VCS URLs updated
* debian/upstream/metadata: added paper
* debian/upstream/signing-key.asc: upstream now signs their releases
* debian/copyright:
- upstream is now BSD-3-clause
- MACS2/khash.h is Expat licensed
* debian/lintian-overrides: silence warning about line breaks
* debian/manpages: install manual pages using dh_installman
* debian/patches/{series,spelling}: fix two spelling errors from upstream
* debian/docs: README is now README.rst
-- Michael R. Crusoe <email address hidden> Sat, 03 Oct 2015 10:37:31 -0700
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Low Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| macs_2.1.0.20150731-1.dsc | 2.1 KiB | dff0568995e03cf70a3db944dc13eda9ea2dfbb2316170f2f54bc91b82062019 |
| macs_2.1.0.20150731.orig.tar.gz | 1.6 MiB | e5a08eb6c90206a02c4acd54ed472cf1c23f2f6bac7114d7e44390ee20061f45 |
| macs_2.1.0.20150731-1.debian.tar.xz | 7.7 KiB | 3a4c8258c2a88e3363fbd36918ed7887535ac052460f1f87539a0e3bf7e13ed9 |
Available diffs
- diff from 2.0.9.1-1 to 2.1.0.20150731-1 (1.6 MiB)
No changes file available.
Binary packages built by this source
- macs: Model-based Analysis of ChIP-Seq on short reads sequencers
MACS empirically models the length of the sequenced ChIP fragments, which
tends to be shorter than sonication or library construction size estimates,
and uses it to improve the spatial resolution of predicted binding sites.
MACS also uses a dynamic Poisson distribution to effectively capture local
biases in the genome sequence, allowing for more sensitive and robust
prediction. MACS compares favorably to existing ChIP-Seq peak-finding
algorithms, is publicly available open source, and can be used for ChIP-Seq
with or without control samples.
- macs-dbgsym: debug symbols for package macs
MACS empirically models the length of the sequenced ChIP fragments, which
tends to be shorter than sonication or library construction size estimates,
and uses it to improve the spatial resolution of predicted binding sites.
MACS also uses a dynamic Poisson distribution to effectively capture local
biases in the genome sequence, allowing for more sensitive and robust
prediction. MACS compares favorably to existing ChIP-Seq peak-finding
algorithms, is publicly available open source, and can be used for ChIP-Seq
with or without control samples.
