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murasaki package

murasaki 1.68.6-13build5 source package in Ubuntu

Changelog

murasaki (1.68.6-13build5) noble; urgency=medium

  * No-change rebuild against libopenmpi3t64

 -- Steve Langasek <email address hidden>  Wed, 13 Mar 2024 18:30:52 +0000

Upload details

Uploaded by:
Steve Langasek
Uploaded to:
Noble
Original maintainer:
Ubuntu Developers
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

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Downloads

File Size SHA-256 Checksum
murasaki_1.68.6.orig-debian-tests-data.tar.gz 3.8 MiB bb3fee13bdf2ee9184667c9a3535dcd54525d9d98782e67c8c8713393cbb7862
murasaki_1.68.6.orig.tar.gz 300.5 KiB ebb3f3df2c0b3dc9f43977685f6c5e37ea483fb4189f7d965acc634bd10aaefe
murasaki_1.68.6-13build5.debian.tar.xz 11.2 KiB 7831a9a3885c715c77a7ed913a4e1cb5cbe231179b67297d820e00e2aa04d1d0
murasaki_1.68.6-13build5.dsc 2.8 KiB fd523a68ce5ad4d2569124187bca4fd640eb866743b028e3e763529c688ede3a

Available diffs

View changes file

Binary packages built by this source

murasaki: homology detection tool across multiple large genomes

 Murasaki is a scalable and fast, language theory-based homology
 detection tool across multiple large genomes. It enable whole-genome
 scale multiple genome global alignments. Supports unlimited length
 gapped-seed patterns and unique TF-IDF based filtering.
 .
 Murasaki is an anchor alignment software, which is
  * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
    40 nodes: 52 wall minutes))
  * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
    Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
  * unlimited pattern length
  * repeat tolerant
  * intelligent noise reduction

murasaki-common: homology detection tool across multiple large genomes (common files)

 Murasaki is a scalable and fast, language theory-based homology
 detection tool across multiple large genomes. It enable whole-genome
 scale multiple genome global alignments. Supports unlimited length
 gapped-seed patterns and unique TF-IDF based filtering.
 .
 Murasaki is an anchor alignment software, which is
  * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
    40 nodes: 52 wall minutes))
  * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
    Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
  * unlimited pattern length
  * repeat tolerant
  * intelligent noise reduction
 .
 This package contains all files that are common to the single core murasaki
 package and the multi core murasaki-mpi package.

murasaki-dbgsym: debug symbols for murasaki
murasaki-mpi: homology detection tool across multiple large genomes (MPI-version)

 Murasaki is a scalable and fast, language theory-based homology
 detection tool across multiple large genomes. It enable whole-genome
 scale multiple genome global alignments. Supports unlimited length
 gapped-seed patterns and unique TF-IDF based filtering.
 .
 Murasaki is an anchor alignment software, which is
  * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
    40 nodes: 52 wall minutes))
  * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
    Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
  * unlimited pattern length
  * repeat tolerant
  * intelligent noise reduction
 .
 This package provides the MPI-enabled binary for murasaki. While this
 will speed up operation on multi-processor machines it will slow down
 on a single processor.

murasaki-mpi-dbgsym: debug symbols for murasaki-mpi