Ubuntu
parsnp package

parsnp 1.7.4+dfsg-1 source package in Ubuntu

Changelog

parsnp (1.7.4+dfsg-1) unstable; urgency=medium

  * New upstream version
  * d/control: add myself to uploaders.
  * Standards-Version: 4.6.1 (routine-update)
  * Delete typos.patch: applied upstream.
  * Refresh proper_calls_to_tools.patch and py3-parsnp-libs.patch.

 -- Étienne Mollier <email address hidden>  Mon, 11 Jul 2022 21:57:03 +0200

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
parsnp_1.7.4+dfsg-1.dsc 2.2 KiB 77ef4bb0dfce2db4383623ddf083cc4f6c82959236d4e2f015948be9fd073459
parsnp_1.7.4+dfsg.orig.tar.xz 129.7 KiB d97087535060b68870b2248acce483cacbe7c4075321c3f1eb8c4484c868a777
parsnp_1.7.4+dfsg-1.debian.tar.xz 9.5 KiB 6b83ba78df0b659591c136673328ac67ca37cf5e2a560eac895f51c0ba75b4ce

Available diffs

No changes file available.

Binary packages built by this source

parsnp: rapid core genome multi-alignment

 Parsnp was designed to align the core genome of hundreds to thousands of
 bacterial genomes within a few minutes to few hours. Input can be both
 draft assemblies and finished genomes, and output includes variant (SNP)
 calls, core genome phylogeny and multi-alignments. Parsnp leverages
 contextual information provided by multi-alignments surrounding SNP
 sites for filtration/cleaning, in addition to existing tools for
 recombination detection/filtration and phylogenetic reconstruction.

parsnp-dbgsym: debug symbols for parsnp