Change log for pdb2pqr package in Ubuntu

pdb2pqr (3.6.1+dfsg-1) unstable; urgency=medium

  * Team Upload.
  * New upstream version 3.6.1+dfsg
  * Update patch to skip propka network test

 -- Nilesh Patra <email address hidden>  Mon, 12 Jun 2023 23:05:08 +0530

Available diffs

• diff from 3.5.2+dfsg-3 to 3.6.1+dfsg-1 (29.8 KiB)

pdb2pqr (3.5.2+dfsg-3) unstable; urgency=medium

  * Standards-Version: 4.6.2 (routine-update)
  * cme fix dpkg-control
  * Drop version restriction from docutils
    Closes: #1030444

 -- Andreas Tille <email address hidden>  Sun, 05 Feb 2023 09:02:21 +0100

Available diffs

• diff from 3.5.2+dfsg-2 to 3.5.2+dfsg-3 (1.2 KiB)

pdb2pqr (3.5.2+dfsg-2) unstable; urgency=medium

  * Team upload.
  * Add missing pytest-3 autopkgtest dependencies.
  * Standards-Version: 4.6.0 (routine-update)
  * debhelper-compat 13 (routine-update)

 -- Andrius Merkys <email address hidden>  Mon, 14 Mar 2022 01:27:58 -0400

Available diffs

• diff from 2.1.1+dfsg-8 to 3.5.2+dfsg-2 (22.5 MiB)

pdb2pqr (2.1.1+dfsg-8) unstable; urgency=medium

  * Team upload.
  * Add an autopkgtest for propka.
  * Fix Python problem causing crashes in propka.
  * Source moved to GitHub.

 -- Andrius Merkys <email address hidden>  Thu, 10 Feb 2022 09:28:48 -0500

Available diffs

• diff from 2.1.1+dfsg-7build1 (in Ubuntu) to 2.1.1+dfsg-8 (1.9 KiB)
• diff from 2.1.1+dfsg-7build2 (in Ubuntu) to 2.1.1+dfsg-8 (1.9 KiB)

pdb2pqr (2.1.1+dfsg-7build2) jammy; urgency=medium

  * No-change rebuild with Python 3.10 as default version

 -- Graham Inggs <email address hidden>  Sat, 15 Jan 2022 09:02:43 +0000

Available diffs

• diff from 2.1.1+dfsg-7build1 to 2.1.1+dfsg-7build2 (338 bytes)

pdb2pqr (2.1.1+dfsg-7build1) hirsute; urgency=medium

  * No-change rebuild to build with python3.9 as default.

 -- Matthias Klose <email address hidden>  Thu, 19 Nov 2020 21:46:31 +0100

Available diffs

• diff from 2.1.1+dfsg-7 (in Debian) to 2.1.1+dfsg-7build1 (331 bytes)

pdb2pqr (2.1.1+dfsg-7) unstable; urgency=medium

  [ Chris Lamb ]
  * Make the build reproducible
    Closes: #955287

  [ Andreas Tille ]
  * Add salsa-ci file (routine-update)
  * Rules-Requires-Root: no (routine-update)

 -- Andreas Tille <email address hidden>  Sun, 29 Mar 2020 18:03:49 +0200

pdb2pqr (2.1.1+dfsg-5build1) focal; urgency=medium

  * No-change rebuild to generate dependencies on python2.

 -- Matthias Klose <email address hidden>  Tue, 17 Dec 2019 12:39:01 +0000

Available diffs

• diff from 2.1.1+dfsg-5 (in Debian) to 2.1.1+dfsg-5build1 (324 bytes)

pdb2pqr (2.1.1+dfsg-5) unstable; urgency=medium

  * Team upload.

  [ Andreas Tille ]
  * Build-Depends: dh-python

  [ Andrius Merkys ]
  * Fixing autopkgtest 'installation-test' by substituting non-existent PDB
    file with an existing one. Removing autopkgtest 'ligands-test' as it
    depended on files that are not shipped by the upstream anymore.
    (Closes: #903759)

 -- Andrius Merkys <email address hidden>  Mon, 27 May 2019 01:52:46 -0400

Available diffs

• diff from 2.1.1+dfsg-4build1 (in Ubuntu) to 2.1.1+dfsg-5 (1.4 KiB)

pdb2pqr (2.1.1+dfsg-4build1) cosmic; urgency=medium

  * No-change rebuild for libgfortran soname change.

 -- Matthias Klose <email address hidden>  Tue, 17 Jul 2018 12:37:06 +0000

Available diffs

• diff from 2.1.1+dfsg-2 (in Debian) to 2.1.1+dfsg-4build1 (4.8 KiB)
• diff from 2.1.1+dfsg-4 (in Debian) to 2.1.1+dfsg-4build1 (333 bytes)

pdb2pqr (2.1.1+dfsg-4) unstable; urgency=medium

  * Adapt test to new location of examples
    Closes: #903759

 -- Andreas Tille <email address hidden>  Sat, 14 Jul 2018 16:09:27 +0200

Available diffs

• diff from 2.1.1+dfsg-3 to 2.1.1+dfsg-4 (480 bytes)

pdb2pqr (2.1.1+dfsg-3) unstable; urgency=medium

  [ Steffen Moeller ]
  * debian/upstream/metadata:
    - Added references to registries
    - yamllint cleanliness

  [ Tatiana Malygina ]
  * Enhance README.test and README.Debian

  [ Andreas Tille ]
  * Remove ancient X-Python-Version field
  * Fix Homepage
  * debhelper 11
  * Point Vcs fields to salsa.debian.org
  * Standards-Version: 4.1.5
  * d/rules: do not parse d/changelog

 -- Andreas Tille <email address hidden>  Fri, 13 Jul 2018 23:21:02 +0200

pdb2pqr (2.1.1+dfsg-2) unstable; urgency=medium

  [ Tatiana Malygina ]
  * Team upload.
  * add README.test, docs, examples and simple testsuite
  * enable hardening
  * add patch to remove hardening-no-relro warning
  * improved tests: add separate tests for use with pdb2pqr-doc installed and
    without it
  * found parameter set when error raised (described in `pdb2pka-test` 
    in testsuite), updated d/docs
  * fixed `pdb2pqr-test` - now should work ok (haven't checked with apbs yet)
  * add patch to remove debug-file-with-no-debug-symbols warning (turn on debug)
  * add networkx to d/control and test dependencies, mention in README.test
  * fix order of commands in debian/rules - override_dh_auto_configure:
    scons is now called after several files are regenerated with swig.

  [ Andreas Tille ]
  * Drop unused lintian overrides

 -- Tatiana Malygina <email address hidden>  Mon, 13 Jun 2016 15:31:19 +0000

Available diffs

• diff from 2.1.1+dfsg-1 to 2.1.1+dfsg-2 (3.6 KiB)

pdb2pqr (2.1.1+dfsg-1) unstable; urgency=medium

  * New upstream version
  * Add new options to d/watch
  * cme fix dpkg-control
  * drop wrapper and use links instead
  * fix interpreter lines by dos2unix

 -- Andreas Tille <email address hidden>  Sat, 07 May 2016 23:56:17 +0200

Available diffs

• diff from 2.1.0+dfsg-1 to 2.1.1+dfsg-1 (12.7 MiB)

pdb2pqr (2.1.0+dfsg-1) unstable; urgency=medium

  * Moved to Git
  * New upstream version
  * Add lintian overrides for false positives source-is-missing
  * Remove unused JS files via Files-Excluded

 -- Andreas Tille <email address hidden>  Fri, 08 Jan 2016 11:06:14 +0100

Available diffs

• diff from 2.0.0+dfsg-2 to 2.1.0+dfsg-1 (4.8 MiB)

pdb2pqr (2.0.0+dfsg-2) unstable; urgency=medium

  * Enable building arch independent packages separately
    Closes: #806222
  * Remove obsolete debian/pycompat

 -- Andreas Tille <email address hidden>  Thu, 26 Nov 2015 20:08:19 +0100

Available diffs

• diff from 2.0.0+dfsg-1 to 2.0.0+dfsg-2 (808 bytes)

pdb2pqr (2.0.0+dfsg-1) unstable; urgency=medium

  * New upstream version
  * cme fix dpkg-control
  * Fix bashism
    Closes: #772350
  * Make the build reproducible by preseting URL and PREFIX (thanks for the
    patch to Reiner Herrmann <email address hidden>)
    Closes: #785546

 -- Andreas Tille <email address hidden>  Mon, 18 May 2015 09:31:58 +0200

Available diffs

• diff from 1.9.0+dfsg-1 to 2.0.0+dfsg-1 (447.0 KiB)

pdb2pqr (1.9.0+dfsg-1) unstable; urgency=medium


  * New upstream version
  * Adapted watch file
  * Move debian/upstream to debian/upstream/metadata
  * cme fix dpkg-control
  * debian/patches/no_privacy_breach_logo.patch: remove potential
    privacy breach logo
  * drop autotools from Build-Depends since build system was changed

 -- Andreas Tille <email address hidden>  Sat, 19 Apr 2014 15:49:25 +0200

Available diffs

• diff from 1.8+dfsg-1 to 1.9.0+dfsg-1 (3.8 MiB)

pdb2pqr (1.8+dfsg-1) unstable; urgency=low


  [ Manuel Prinz ]
  * Fixed build issues on HURD. Thanks to Barry deFreese for the patch!
    Closes: 674976.
  * Pass hardening flags to linker. Added fix-hardening.patch, changed
    debian/rules.

  [ Andreas Tille ]
  * Use '+dfsg' appendix to mark repackaged upstream source (adapted
    debian/watch)
  * debian/rules:
     - repackaging is done using enhanced uscan
     - s/autotools-dev/autotools_dev/
       Closes: #727491
  * debian/control:
     - cme fix dpkg-control
     - canonical Vcs fields
  * debian/copyright: DEP5

 -- Andreas Tille <email address hidden>  Thu, 24 Oct 2013 09:34:23 +0200

Available diffs

• diff from 1.8-1 to 1.8+dfsg-1 (4.9 KiB)

pdb2pqr (1.8-1) unstable; urgency=low


  [ Andreas Tille ]
  * debian/upstream: Add publication information

  [ Manuel Prinz ]
  * New upstream version. Updated debian/copyright.
  * Updated Standards-Version to 3.9.3. No changes needed.
  * Changed Maintainer to Debian Med team.
  * Pass -fPIC to CXXFLAGS. Thanks to Konstantinos Margaritis for the patch!
    Closes: 654240. LP: 935357.
  * Updated PROPKA packaging to new version. (It's written in Python now.)
  * Added fix-hashbangs.patch.
  * Merged pdb2pqr and propka packages as they are more interconnected since
    this upstream version. Updated README.Debian accordingly.

 -- Manuel Prinz <email address hidden>  Thu, 21 Jun 2012 16:21:50 +0200

Available diffs

• diff from 1.7-2 to 1.8-1 (476.0 KiB)

pdb2pqr (1.7-2) unstable; urgency=low


  * Pass -fPIC to compiler on all architectures. Closes: 636204. LP: 791313.
  * Bumped Standards-Version to 3.9.2. No changes needed.

 -- Manuel Prinz <email address hidden>  Wed, 31 Aug 2011 00:22:15 +0200

pdb2pqr (1.7-1) unstable; urgency=low

  * New upstream release. Closes: #416269, #420734.
 -- Ubuntu Archive Auto-Sync <email address hidden>   Wed,  04 May 2011 11:07:36 +0000