phast 1.6+dfsg-4 source package in Ubuntu
Changelog
phast (1.6+dfsg-4) unstable; urgency=medium
[ Andreas Tille ]
* s/libatlas-base-dev/liblapacke-dev/ in Build-Depends to use LAPACKE
instead of clapack
* Provide alternative Build-Depends to liblapack-dev and libblas-dev
* Standards-Version: 4.6.2 (routine-update)
* Upstream email removed from d/copyright since its bouncing
[ Sébastien Villemot ]
* Complete migration away from ATLAS
Closes: #1056681
-- Andreas Tille <email address hidden> Wed, 29 Nov 2023 10:25:18 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Noble | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| phast_1.6+dfsg-4.dsc | 2.0 KiB | 5f4811f66174db7037597be5b38bf18ad5c11f8c7e58ce22828e3411ae9e21d1 |
| phast_1.6+dfsg.orig.tar.xz | 1.7 MiB | 7deae15e8bd8ce8e11b251b42795e0595dd86271360b08d15e6ba107ae66863f |
| phast_1.6+dfsg-4.debian.tar.xz | 56.6 KiB | 7f5b1adf0df0a8290be8f07117762b2bea42720e2e9b2752e54f680b187f0678 |
Available diffs
- diff from 1.6+dfsg-3 to 1.6+dfsg-4 (1.4 KiB)
No changes file available.
Binary packages built by this source
- phast: phylogenetic analysis with space/time models
PHAST is a software package for comparative and evolutionary genomics.
It consists of about half a dozen major programs, plus more than a dozen
utilities for manipulating sequence alignments, phylogenetic trees, and
genomic annotations. For the most part, PHAST focuses on two kinds of
applications: the identification of novel functional elements, including
protein-coding exons and evolutionarily conserved sequences; and
statistical phylogenetic modeling, including estimation of model
parameters, detection of signatures of selection, and reconstruction of
ancestral sequences.
.
PHAST does not support phylogeny reconstruction or sequence alignment,
and it is designed for use with DNA sequences only (see Comparison).
- phast-dbgsym: debug symbols for phast
