proalign 0.603-5 source package in Ubuntu
Changelog
proalign (0.603-5) unstable; urgency=medium * Upstream has orphaned software * Standards-Version: 4.5.0 (routine-update) * debhelper-compat 12 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Fix day-of-week for changelog entry 0.603-1. -- Andreas Tille <email address hidden> Mon, 27 Apr 2020 21:38:27 +0200
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| proalign_0.603-5.dsc | 2.0 KiB | 6fe187714add859419718e296d59c433621a9842ab5647744774b7068cfbd4ce |
| proalign_0.603.orig.tar.gz | 61.8 KiB | ae4c42e6e01b5dacb14e425e654e25e80569bf6cdcd3e7ef68ef31bef8d712d2 |
| proalign_0.603-5.debian.tar.xz | 3.9 KiB | d2589f47077edbc3eacea0264e4e88cbb5f886b7f1b70b16ac77afb54bc46f11 |
Available diffs
- diff from 0.603-4 to 0.603-5 (1.4 KiB)
No changes file available.
Binary packages built by this source
- proalign: Probabilistic multiple alignment program
ProAlign performs probabilistic sequence alignments using hidden Markov
models (HMM). It includes a graphical interface (GUI) allowing to (i)
perform alignments of nucleotide or amino-acid sequences, (ii) view the
quality of solutions, (iii) filter the unreliable alignment regions and
(iv) export alignments to other software.
.
ProAlign uses a progressive method, such that multiple alignment is
created stepwise by performing pairwise alignments in the nodes of a
guide tree. Sequences are described with vectors of character
probabilities, and each pairwise alignment reconstructs the ancestral
(parent) sequence by computing the probabilities of different
characters according to an evolutionary model.
