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python-biom-format package

python-biom-format 2.1.12-3 source package in Ubuntu

Changelog

python-biom-format (2.1.12-3) unstable; urgency=medium

  * Team upload.
  * d/control: remove python3-nose (Closes: #1018464)

 -- Mohammed Bilal <email address hidden>  Sat, 03 Dec 2022 23:45:03 +0530

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
python
Urgency:
Medium Urgency

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File Size SHA-256 Checksum
python-biom-format_2.1.12-3.dsc 2.4 KiB 8c458872e45d3fc0f99ee7509cc071d5759dd7ac424151b2ef6274d7894a8585
python-biom-format_2.1.12.orig.tar.xz 8.2 MiB 071dba4520bbf795ef23a1817ff71a799025178402eaf09fbb39349e3560b582
python-biom-format_2.1.12-3.debian.tar.xz 10.6 KiB f0758a1cd4de8474322daf2f9f16f670438435c0a8c253612ec61fcc91e9acfa

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Binary packages built by this source

python-biom-format-doc: documentation for BIOM format

 The BIOM file format (canonically pronounced biome) is designed to be a
 general-use format for representing biological sample by observation
 contingency tables. BIOM is a recognized standard for the Earth
 Microbiome Project and is a Genomics Standards Consortium candidate
 project.
 .
 The BIOM format is designed for general use in broad areas of
 comparative -omics. For example, in marker-gene surveys, the primary use
 of this format is to represent OTU tables: the observations in this case
 are OTUs and the matrix contains counts corresponding to the number of
 times each OTU is observed in each sample. With respect to metagenome
 data, this format would be used to represent metagenome tables: the
 observations in this case might correspond to SEED subsystems, and the
 matrix would contain counts corresponding to the number of times each
 subsystem is observed in each metagenome. Similarly, with respect to
 genome data, this format may be used to represent a set of genomes: the
 observations in this case again might correspond to SEED subsystems, and
 the counts would correspond to the number of times each subsystem is
 observed in each genome.
 .
 This package provides the documentation for the BIOM format Python package.

python3-biom-format: Biological Observation Matrix (BIOM) format (Python 3)

 The BIOM file format (canonically pronounced biome) is designed to be a
 general-use format for representing biological sample by observation
 contingency tables. BIOM is a recognized standard for the Earth
 Microbiome Project and is a Genomics Standards Consortium candidate
 project.
 .
 The BIOM format is designed for general use in broad areas of
 comparative -omics. For example, in marker-gene surveys, the primary use
 of this format is to represent OTU tables: the observations in this case
 are OTUs and the matrix contains counts corresponding to the number of
 times each OTU is observed in each sample. With respect to metagenome
 data, this format would be used to represent metagenome tables: the
 observations in this case might correspond to SEED subsystems, and the
 matrix would contain counts corresponding to the number of times each
 subsystem is observed in each metagenome. Similarly, with respect to
 genome data, this format may be used to represent a set of genomes: the
 observations in this case again might correspond to SEED subsystems, and
 the counts would correspond to the number of times each subsystem is
 observed in each genome.
 .
 This package provides the BIOM format library for the Python 3 interpreter.

python3-biom-format-dbgsym: debug symbols for python3-biom-format