Ubuntu
python-bx package

python-bx 0.8.4-2build1 source package in Ubuntu

Changelog

python-bx (0.8.4-2build1) focal; urgency=medium

  * No-change rebuild to build with python3.8.

 -- Matthias Klose <email address hidden>  Fri, 18 Oct 2019 18:49:08 +0000

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Uploaded by:
Matthias Klose
Uploaded to:
Focal
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

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Series Pocket Published Component Section

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File Size SHA-256 Checksum
python-bx_0.8.4.orig.tar.gz 1.6 MiB 7612636f06e03893b0b498fae5499d3af39f1883a84c78148a6fc650e5c7c864
python-bx_0.8.4-2build1.debian.tar.xz 8.4 KiB b0196f79fa02b32755f27e684c3da747521195e1838d777c6f6b77cecef0c921
python-bx_0.8.4-2build1.dsc 2.1 KiB 3e51c0ea242e20011c76b7b55a0b63eca7ed247a43653666fb655083e7925238

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Binary packages built by this source

python3-bx: library to manage genomic data and its alignment

 The bx-python project is a Python3 library and associated set of scripts to
 allow for rapid implementation of genome scale analyses. The library contains
 a variety of useful modules, but the particular strengths are:
  * Classes for reading and working with genome-scale multiple local
    alignments (in MAF, AXT, and LAV formats)
  * Generic data structure for indexing on disk files that contain blocks of
    data associated with intervals on various sequences (used, for example, to
    provide random access to individual alignments in huge files; optimized
    for use over network filesystems)
  * Data structures for working with intervals on sequences
  * "Binned bitsets" which act just like chromosome sized bit arrays, but
    lazily allocate regions and allow large blocks of all set or all unset
    bits to be stored compactly
  * "Intersecter" for performing fast intersection tests that preserve both
    query and target intervals and associated annotation

python3-bx-dbgsym: debug symbols for python3-bx