python-nanomath 1.2.1+ds-1 source package in Ubuntu
Changelog
python-nanomath (1.2.1+ds-1) unstable; urgency=medium * New upstream version 1.2.1+ds -- Nilesh Patra <email address hidden> Sun, 15 Aug 2021 19:32:14 +0530
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- all
- Section:
- misc
- Urgency:
- Medium Urgency
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
python-nanomath_1.2.1+ds-1.dsc | 2.1 KiB | c7b1b537a84d4e49a8fa5155572dfd66d83553676a6a6e7d27cb96c69f623d40 |
python-nanomath_1.2.1+ds.orig.tar.xz | 16.1 KiB | 297875a51294cb738b2977a7834b30e98927427e8e7c2c69a72189ae7b48c7f4 |
python-nanomath_1.2.1+ds-1.debian.tar.xz | 3.1 KiB | cba561882b6c30044f605a7f6cfc044c3f2deaa7f1a75497998ac6dd79689417 |
Available diffs
- diff from 1.2.0+ds-1 to 1.2.1+ds-1 (1.4 KiB)
No changes file available.
Binary packages built by this source
- python3-nanomath: simple math function for other Oxford Nanopore processing scripts
This Python3 module provides a few simple math and statistics functions for
other scripts processing Oxford Nanopore sequencing data.
.
* Calculate read N50 from a set of lengths get_N50(readlenghts)
* Remove extreme length outliers from a dataset
remove_length_ outliers( dataframe, columname)
* Calculate the average Phred quality of a read ave_qual(qualscores)
* Write out the statistics report after calling readstats function
write_stats(dataframe , outputname)
* Compute a number of statistics, return a dictionary
calc_read_stats( dataframe)