Change log for python-pybedtools package in Ubuntu

python-pybedtools (0.10.0-1) unstable; urgency=medium

  * New upstream version. Closes: #1068960
  * Refreshed patches.

 -- Michael R. Crusoe <email address hidden>  Fri, 03 May 2024 17:43:13 +0200

Available diffs

• diff from 0.9.1-1build1 (in Ubuntu) to 0.10.0-1 (10.1 KiB)

python-pybedtools (0.9.1-1build1) noble; urgency=medium

  * No-change rebuild with Python 3.12 only

 -- Graham Inggs <email address hidden>  Wed, 10 Apr 2024 17:39:55 +0000

Available diffs

• diff from 0.9.1-1 (in Debian) to 0.9.1-1build1 (320 bytes)

python-pybedtools (0.9.1-1) unstable; urgency=medium

  [ Lance Lin ]
  * Team upload.
  * New upstream version
  * d/control: Replace autopkgtest-pkg-python with autopkgtest-pkg-pybuild
  * d/rules:
   - Enable build tests
   - Deselect test_chromsizes test, needs internet
   - Build docs with sphinx-build for Sphinx 7.1 (Closes: #1042651)
   - Remove autogenerated files from build
  * d/python-pybedtools-doc.docs: Change sphinx docs location
  * d/source/options: Ignore modified source files (Closes: #1048006)
  * d/patches/yaml_safe_load.patch: Modify safe_load for full_load where needed

  [ Andreas Tille ]
  * Remove unknown files in python module directory
  * Testsuite: autopkgtest-pkg-python (routine-update)
  * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)
  * Remove field Testsuite on binary package python-pybedtools-doc that
    duplicates source.

 -- Lance Lin <email address hidden>  Fri, 27 Oct 2023 19:35:26 +0700

Available diffs

• diff from 0.9.0-4build1 (in Ubuntu) to 0.9.1-1 (9.4 KiB)

python-pybedtools (0.9.0-4build1) lunar; urgency=medium

  * No-change rebuild with Python 3.11 only

 -- Graham Inggs <email address hidden>  Thu, 16 Mar 2023 07:28:32 +0000

Available diffs

• diff from 0.9.0-4 (in Debian) to 0.9.0-4build1 (318 bytes)

python-pybedtools (0.9.0-4) unstable; urgency=medium

  * Team upload.
  * d/control: restore python3 all versions support now that pysam supports
    python3.11.
    Thanks to Andreas Beckmann for the reminder. (Closes: #1025116)
  * d/copyright: update copyright year.
  * d/control: declare compliance to standards version 4.6.2.

 -- Étienne Mollier <email address hidden>  Mon, 02 Jan 2023 21:49:24 +0100

Available diffs

• diff from 0.9.0-3 to 0.9.0-4 (860 bytes)
• diff from 0.9.0-3build1 (in Ubuntu) to 0.9.0-4 (945 bytes)

python-pybedtools (0.9.0-3build1) lunar; urgency=medium

  * No-change rebuild with Python 3.11 as default

 -- Graham Inggs <email address hidden>  Mon, 26 Dec 2022 10:04:24 +0000

Available diffs

• diff from 0.9.0-3 (in Debian) to 0.9.0-3build1 (322 bytes)

python-pybedtools (0.9.0-3) unstable; urgency=medium

  * Team Upload.
  * d/watch: repair watch file from github changes.
  * d/control: stick to python3.10. (Closes: #1025116)

 -- Étienne Mollier <email address hidden>  Fri, 02 Dec 2022 12:19:36 +0100

Available diffs

• diff from 0.9.0-2 to 0.9.0-3 (823 bytes)

python-pybedtools (0.9.0-1build2) lunar; urgency=medium

  * No-change rebuild with Python 3.11 as supported

 -- Graham Inggs <email address hidden>  Thu, 03 Nov 2022 18:56:33 +0000

Available diffs

• diff from 0.9.0-1build1 to 0.9.0-1build2 (323 bytes)

python-pybedtools (0.9.0-2) unstable; urgency=medium

  * Team Upload.
  * Add patch to replace yaml.load calls with
    yaml.safe_load (Closes: #1022076)
  * Change B-D from python3-nose to python3-pytest (Closes: #1018560)
  * Bump Standards-Version to 4.6.1 (no changes needed)

 -- Nilesh Patra <email address hidden>  Sun, 23 Oct 2022 16:24:34 +0530

Available diffs

• diff from 0.9.0-1build2 (in Ubuntu) to 0.9.0-2 (1.5 KiB)

python-pybedtools (0.9.0-1build1) jammy; urgency=medium

  * No-change rebuild with Python 3.10 only

 -- Graham Inggs <email address hidden>  Wed, 16 Mar 2022 21:46:32 +0000

Available diffs

• diff from 0.9.0-1 (in Debian) to 0.9.0-1build1 (317 bytes)

python-pybedtools (0.9.0-1) unstable; urgency=medium

  * Team upload.
  * Enable uscan downloading sensible file name

 -- Andreas Tille <email address hidden>  Thu, 17 Feb 2022 15:21:29 +0100

Available diffs

• diff from 0.8.2-1 to 0.9.0-1 (8.6 KiB)

python-pybedtools (0.8.2-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Standards-Version: 4.6.0 (routine-update)
  * debhelper-compat 13 (routine-update)
  * watch file standard 4 (routine-update)
  * Fix installation of examples
  * No need to fix permissions any more

 -- Andreas Tille <email address hidden>  Mon, 18 Oct 2021 14:08:37 +0200

Available diffs

• diff from 0.8.0-5build2 (in Ubuntu) to 0.8.2-1 (162.5 KiB)
• diff from 0.8.0-5build3 (in Ubuntu) to 0.8.2-1 (162.6 KiB)

python-pybedtools (0.8.0-5build3) jammy; urgency=medium

  * No-change rebuild to add python3.10.

 -- Matthias Klose <email address hidden>  Mon, 18 Oct 2021 00:21:17 +0200

Available diffs

• diff from 0.8.0-5build2 to 0.8.0-5build3 (330 bytes)

python-pybedtools (0.8.0-5build2) hirsute; urgency=medium

  * No-change rebuild to drop python3.8 extensions.

 -- Matthias Klose <email address hidden>  Mon, 07 Dec 2020 18:24:58 +0100

Available diffs

• diff from 0.8.0-5build1 to 0.8.0-5build2 (335 bytes)

python-pybedtools (0.8.0-5build1) hirsute; urgency=medium

  * No-change rebuild to build with python3.9 as supported.

 -- Matthias Klose <email address hidden>  Mon, 26 Oct 2020 14:03:03 +0100

Available diffs

• diff from 0.8.0-5 (in Debian) to 0.8.0-5build1 (333 bytes)

python-pybedtools (0.8.0-5) unstable; urgency=medium

  * Fix binary-all build
    Closes: #960746

 -- Andreas Tille <email address hidden>  Sun, 17 May 2020 07:51:43 +0200

Available diffs

• diff from 0.8.0-3build1 (in Ubuntu) to 0.8.0-5 (2.2 KiB)
• diff from 0.8.0-4 to 0.8.0-5 (474 bytes)

python-pybedtools (0.8.0-4) unstable; urgency=medium

  * Team upload.
  * Rebuild against available architectures
    Closes: #960411
  * Standards-Version: 4.5.0 (routine-update)
  * Remove trailing whitespace in debian/rules (routine-update)
  * Add salsa-ci file (routine-update)
  * Rules-Requires-Root: no (routine-update)
  * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
    Repository-Browse.
  * Add missing shebang lines in scripts
  * Move example script to examples
  * Fix permission of script

 -- Andreas Tille <email address hidden>  Wed, 13 May 2020 09:14:53 +0200

python-pybedtools (0.8.0-3build1) focal; urgency=medium

  * No-change rebuild to drop python3.7.

 -- Matthias Klose <email address hidden>  Tue, 18 Feb 2020 09:38:58 +0100

Available diffs

• diff from 0.8.0-3 (in Debian) to 0.8.0-3build1 (341 bytes)

python-pybedtools (0.8.0-3) unstable; urgency=medium

  * Mark the -doc package Multi-Arch: foreign
  * debhelper-compat 12
  * Testsuite: autopkgtest-pkg-python
  * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target
  * Remove trailing whitespace in debian/control
  * Set upstream metadata fields: Repository.
  * Remove obsolete fields Name from debian/upstream/metadata.
  * -doc: add ${sphinxdoc:Built-Using}

 -- Michael R. Crusoe <email address hidden>  Thu, 14 Nov 2019 13:16:33 +0100

Available diffs

• diff from 0.8.0-2build1 (in Ubuntu) to 0.8.0-3 (2.1 KiB)

python-pybedtools (0.8.0-2build1) focal; urgency=medium

  * No-change rebuild to build with python3.8.

 -- Matthias Klose <email address hidden>  Fri, 18 Oct 2019 18:52:58 +0000

Available diffs

• diff from 0.8.0-2 (in Debian) to 0.8.0-2build1 (334 bytes)

python-pybedtools (0.8.0-2) unstable; urgency=medium

  * Improved parsing of version of bedtool binary
  * Standards-Version: 4.3.0

 -- Steffen Moeller <email address hidden>  Fri, 02 Aug 2019 16:15:52 +0200

Available diffs

• diff from 0.8.0-1 to 0.8.0-2 (1.2 KiB)

python-pybedtools (0.8.0-1) unstable; urgency=medium

  * New upstream version.

  * d/control:
    - Standards-Version: 4.3.0
    - No Python2 packages
    - Vcs links adapted for new home on salsa.d.o

  * d/copyright
    - adjusted paths for LGPL 2.1 files
    - added notion of GPL-2 (not later) files, credits for spotting
      those go to Thorsten Alteholz
      Created issue https://github.com/daler/pybedtools/issues/271
      proposing to homogenize that licensing.

 -- Steffen Moeller <email address hidden>  Sat, 19 Jan 2019 15:41:02 +0100

python-pybedtools (0.7.8-1ubuntu3) artful; urgency=medium

  * No-change rebuild to drop _PyFPE support.

 -- Matthias Klose <email address hidden>  Tue, 05 Sep 2017 08:23:16 +0000

Available diffs

• diff from 0.7.8-1ubuntu2 to 0.7.8-1ubuntu3 (327 bytes)

python-pybedtools (0.7.8-1ubuntu2) artful; urgency=medium

  * No-change rebuild to build to drop python3.5.

 -- Matthias Klose <email address hidden>  Sat, 05 Aug 2017 18:41:34 +0000

Available diffs

• diff from 0.7.8-1ubuntu1 to 0.7.8-1ubuntu2 (357 bytes)

python-pybedtools (0.7.8-1ubuntu1) artful; urgency=medium

  * Fix Build-Depends for case where more than one version of Python 3 is
    supported.

 -- Michael Hudson-Doyle <email address hidden>  Mon, 26 Jun 2017 22:58:51 +1200

Available diffs

• diff from 0.7.8-1 (in Debian) to 0.7.8-1ubuntu1 (647 bytes)

python-pybedtools (0.7.8-1) unstable; urgency=medium

  * Initial release. (Closes: #851358)

 -- Michael R. Crusoe <email address hidden>  Sat, 14 Jan 2017 01:51:01 -0800