python-pyvcf 0.6.8+git20170215.476169c-7build2 source package in Ubuntu
Changelog
python-pyvcf (0.6.8+git20170215.476169c-7build2) hirsute; urgency=medium * No-change rebuild to drop python3.8 extensions. -- Matthias Klose <email address hidden> Mon, 07 Dec 2020 18:22:08 +0100
Upload details
- Uploaded by:
- Matthias Klose
- Uploaded to:
- Hirsute
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| python-pyvcf_0.6.8+git20170215.476169c.orig.tar.xz | 913.8 KiB | df89a50c3b0faed0acffe86377ceca77053b2fc516de95e4a14623bbef42fb87 |
| python-pyvcf_0.6.8+git20170215.476169c-7build2.debian.tar.xz | 5.4 KiB | d21e8ab07fcce594535c10758c2d7d2f59369dbcf86caa9a30b9956c24c22d9c |
| python-pyvcf_0.6.8+git20170215.476169c-7build2.dsc | 2.4 KiB | bf7f2eb348b4fddd692ab2ae60ddadeb5af305b5b3427ccc088083e1dd3a4486 |
Available diffs
Binary packages built by this source
- python-pyvcf-examples: No summary available for python-pyvcf-examples in ubuntu hirsute.
No description available for python-
pyvcf-examples in ubuntu hirsute.
- python3-vcf: No summary available for python3-vcf in ubuntu hirsute.
No description available for python3-vcf in ubuntu hirsute.
- python3-vcf-dbgsym: No summary available for python3-vcf-dbgsym in ubuntu hirsute.
No description available for python3-vcf-dbgsym in ubuntu hirsute.
- pyvcf: helper scripts for Variant Call Format (VCF) parser
The Variant Call Format (VCF) specifies the format of a text file used
in bioinformatics for storing gene sequence variations. The format has
been developed with the advent of large-scale genotyping and DNA
sequencing projects, such as the 1000 Genomes Project.
.
The intent of this module is to mimic the ``csv`` module in the Python
stdlib, as opposed to more flexible serialization formats like JSON or
YAML. ``vcf`` will attempt to parse the content of each record based on
the data types specified in the meta-information lines -- specifically
the ##INFO and
##FORMAT lines. If these lines are missing or incomplete, it will check
against the reserved types mentioned in the spec. Failing that, it will
just return strings.
.
This package provides helper scripts using python3-pyvcf.
