python-pyvcf 0.6.8+git20170215.476169c-8build1 source package in Ubuntu

Changelog

python-pyvcf (0.6.8+git20170215.476169c-8build1) jammy; urgency=medium

  * No-change rebuild with Python 3.10 only

 -- Graham Inggs <email address hidden>  Wed, 16 Mar 2022 21:47:02 +0000

Upload details

Uploaded by:
Graham Inggs
Uploaded to:
Jammy
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Kinetic release universe misc
Jammy release universe misc

Downloads

File Size SHA-256 Checksum
python-pyvcf_0.6.8+git20170215.476169c.orig.tar.xz 913.8 KiB df89a50c3b0faed0acffe86377ceca77053b2fc516de95e4a14623bbef42fb87
python-pyvcf_0.6.8+git20170215.476169c-8build1.debian.tar.xz 9.8 KiB 3eef534f9b083fab76ca6a3c7c4679f013d98434229a32538be7a7d53111d542
python-pyvcf_0.6.8+git20170215.476169c-8build1.dsc 2.4 KiB 4179fa69a2d9a9557b2840e31161f57c27fa0227c063bd21a0fd1de9d475b76c

View changes file

Binary packages built by this source

python-pyvcf-examples: Example data for Variant Call Format (VCF) parser for Python

 The Variant Call Format (VCF) specifies the format of a text file used
 in bioinformatics for storing gene sequence variations. The format has
 been developed with the advent of large-scale genotyping and DNA
 sequencing projects, such as the 1000 Genomes Project.
 .
 The intent of this module is to mimic the ``csv`` module in the Python
 stdlib, as opposed to more flexible serialization formats like JSON or
 YAML. ``vcf`` will attempt to parse the content of each record based on
 the data types specified in the meta-information lines -- specifically
 the ##INFO and
 ##FORMAT lines. If these lines are missing or incomplete, it will check
 against the reserved types mentioned in the spec. Failing that, it will
 just return strings.
 .
 This package provides example data to test the Python modules.

python3-vcf: Variant Call Format (VCF) parser for Python 3

 The Variant Call Format (VCF) specifies the format of a text file used
 in bioinformatics for storing gene sequence variations. The format has
 been developed with the advent of large-scale genotyping and DNA
 sequencing projects, such as the 1000 Genomes Project.
 .
 The intent of this module is to mimic the ``csv`` module in the Python
 stdlib, as opposed to more flexible serialization formats like JSON or
 YAML. ``vcf`` will attempt to parse the content of each record based on
 the data types specified in the meta-information lines -- specifically
 the ##INFO and
 ##FORMAT lines. If these lines are missing or incomplete, it will check
 against the reserved types mentioned in the spec. Failing that, it will
 just return strings.
 .
 This package provides the Python 3 modules.

python3-vcf-dbgsym: debug symbols for python3-vcf
pyvcf: helper scripts for Variant Call Format (VCF) parser

 The Variant Call Format (VCF) specifies the format of a text file used
 in bioinformatics for storing gene sequence variations. The format has
 been developed with the advent of large-scale genotyping and DNA
 sequencing projects, such as the 1000 Genomes Project.
 .
 The intent of this module is to mimic the ``csv`` module in the Python
 stdlib, as opposed to more flexible serialization formats like JSON or
 YAML. ``vcf`` will attempt to parse the content of each record based on
 the data types specified in the meta-information lines -- specifically
 the ##INFO and
 ##FORMAT lines. If these lines are missing or incomplete, it will check
 against the reserved types mentioned in the spec. Failing that, it will
 just return strings.
 .
 This package provides helper scripts using python3-pyvcf.