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r-cran-alakazam package

r-cran-alakazam 1.3.0-1 source package in Ubuntu

Changelog

r-cran-alakazam (1.3.0-1) unstable; urgency=medium

  * Team upload.
  * Disable reprotest
  * Standards-Version: 4.6.2 (routine-update)
  * dh-update-R to update Build-Depends (routine-update)

 -- Andreas Tille <email address hidden>  Thu, 12 Oct 2023 15:28:14 +0200

Upload details

Uploaded by:
Debian R Packages Maintainers
Uploaded to:
Sid
Original maintainer:
Debian R Packages Maintainers
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe misc
Noble release universe misc

Downloads

File Size SHA-256 Checksum
r-cran-alakazam_1.3.0-1.dsc 2.3 KiB 27f95158e5602f586a54e8d1e419bdcce68d960a893723c919b4dca72f06c8e7
r-cran-alakazam_1.3.0.orig.tar.gz 2.0 MiB 1b15be5eeb1991900154820d9d2b0c691bde2c63e1287c2bf3fb45ebdbb35405
r-cran-alakazam_1.3.0-1.debian.tar.xz 13.9 KiB 3d0a3c17067c4830fb6478d10075e8abd56c676b1689c9de99d2404c2920e3a8

Available diffs

No changes file available.

Binary packages built by this source

r-cran-alakazam: Immunoglobulin Clonal Lineage and Diversity Analysis

 Alakazam is part of the Immcantation analysis framework for Adaptive
 Immune Receptor Repertoire sequencing (AIRR-seq) and provides a set of
 tools to investigate lymphocyte receptor clonal lineages, diversity,
 gene usage, and other repertoire level properties, with a focus on
 high-throughput immunoglobulin (Ig) sequencing.
 .
 Alakazam serves five main purposes:
  * Providing core functionality for other R packages in the Immcantation
    framework. This includes common tasks such as file I/O, basic DNA
    sequence manipulation, and interacting with V(D)J segment and gene
    annotations.
  * Providing an R interface for interacting with the output of the
    pRESTO and Change-O tool suites.
  * Performing lineage reconstruction on clonal populations of Ig
    sequences and analyzing the topology of the resultant lineage trees.
  * Performing clonal abundance and diversity analysis on lymphocyte
    repertoires.
  * Performing physicochemical property analyses of lymphocyte receptor
    sequences.

r-cran-alakazam-dbgsym: debug symbols for r-cran-alakazam