ragout 2.3-5 source package in Ubuntu
Changelog
ragout (2.3-5) unstable; urgency=medium
* Port to Python3.12 by removing vendored six.py
Closes: #1061835
* Standards-Version: 4.6.2 (routine-update)
* Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)
-- Andreas Tille <email address hidden> Fri, 02 Feb 2024 11:01:34 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Oracular | release | universe | misc | |
| Noble | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| ragout_2.3-5.dsc | 2.1 KiB | 72146e750738ab342e566c7299e6fecea995acc3a66a0340868d779a6b200c96 |
| ragout_2.3.orig.tar.xz | 11.7 MiB | 135d2dead97f0488b37d1ce399e84753390f61d24f7ea9513d228c802a678a1b |
| ragout_2.3-5.debian.tar.xz | 14.6 KiB | 17e84d4a2a9fafa5fde026380f07de6dd5405df63992b175da5c9aa5ce15b1e9 |
Available diffs
- diff from 2.3-4 to 2.3-5 (10.3 KiB)
No changes file available.
Binary packages built by this source
- ragout: Reference-Assisted Genome Ordering UTility
Ragout (Reference-Assisted Genome Ordering UTility) is a tool for
chromosome-level scaffolding using multiple references. Given initial
assembly fragments (contigs/scaffolds) and one or multiple related
references (complete or draft), it produces a chromosome-scale assembly
(as a set of scaffolds).
.
The approach is based on the analysis of genome rearrangements (like
inversions or chromosomal translocations) between the input genomes and
reconstructing the most parsimonious structure of the target genome.
.
Ragout now supports both small and large genomes (of mammalian scale
and complexity). The assembly of highly polymorphic genomes is
currently limited.
- ragout-dbgsym: debug symbols for ragout
- ragout-examples: Reference-Assisted Genome Ordering UTility (example data)
Ragout (Reference-Assisted Genome Ordering UTility) is a tool for
chromosome-level scaffolding using multiple references. Given initial
assembly fragments (contigs/scaffolds) and one or multiple related
references (complete or draft), it produces a chromosome-scale assembly
(as a set of scaffolds).
.
The approach is based on the analysis of genome rearrangements (like
inversions or chromosomal translocations) between the input genomes and
reconstructing the most parsimonious structure of the target genome.
.
Ragout now supports both small and large genomes (of mammalian scale
and complexity). The assembly of highly polymorphic genomes is
currently limited.
.
This package contains example data to test ragout.
