Ubuntu
repeatmasker-recon package

repeatmasker-recon 1.08-8 source package in Ubuntu

Changelog

repeatmasker-recon (1.08-8) unstable; urgency=medium

  * Team upload.
  * Add patch to add in missing include. Close: #1066541
  * Standards-Version: 4.6.2 (routine-update)

 -- Michael R. Crusoe <email address hidden>  Wed, 13 Mar 2024 16:00:34 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe misc
Noble release universe misc

Downloads

File Size SHA-256 Checksum
repeatmasker-recon_1.08-8.dsc 2.0 KiB 1bdb5a121316779b79f0ff96c88209e527f115e662f7c01fd199bb07f5426001
repeatmasker-recon_1.08.orig.tar.gz 105.9 KiB 699765fa49d18dbfac9f7a82ecd054464b468cb7521abe9c2bd8caccf08ee7d8
repeatmasker-recon_1.08-8.debian.tar.xz 5.8 KiB 4d1ac5ddbc014ba414efad01003c4df7fcb6046debba1f75376aca2123be36b6

Available diffs

No changes file available.

Binary packages built by this source

repeatmasker-recon: finds repeat families from biological sequences

 The RECON package implements a de novo algorithm for the identification
 of repeat families from biological sequences.
 .
 The program implements an approach for the de novo identification and
 classification of repeat sequence families that is based on extensions
 to the usual approach of single linkage clustering of local pairwise
 alignments between genomic sequences. The extensions use multiple
 alignment information to define the boundaries of individual copies of
 the repeats and to distinguish homologous but distinct repeat element
 families. When tested on the human genome, this approach was able to
 properly identify and group known transposable elements. The program,
 should be useful for first-pass automatic classification of repeats in
 newly sequenced genomes.

repeatmasker-recon-dbgsym: debug symbols for repeatmasker-recon