Ubuntu
rna-star package

rna-star 2.7.3a+dfsg-1build1 source package in Ubuntu

Changelog

rna-star (2.7.3a+dfsg-1build1) focal; urgency=medium

  * No-change upload for libhts soname change.

 -- Matthias Klose <email address hidden>  Fri, 31 Jan 2020 22:43:27 +0100

Upload details

Uploaded by:
Matthias Klose
Uploaded to:
Focal
Original maintainer:
Debian Med
Architectures:
amd64 arm64 ppc64el mips64el
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
rna-star_2.7.3a+dfsg.orig.tar.xz 392.4 KiB 31ce1c59dfcb7786630dadb31900aa28bfff4add297bb81e0a3ca2222299eb2f
rna-star_2.7.3a+dfsg-1build1.debian.tar.xz 366.4 KiB 9d7db92738b923f8b597db0a4e78b21e3c7147ea09c6c53828549832400490e1
rna-star_2.7.3a+dfsg-1build1.dsc 2.1 KiB 7fc387dc29657b72ccac2f6a25ff44d5e0211a13811ae6b06bb9393e18e92882

View changes file

Binary packages built by this source

rna-star: ultrafast universal RNA-seq aligner

 Spliced Transcripts Alignment to a Reference (STAR) software based on a
 previously undescribed RNA-seq alignment algorithm that uses sequential
 maximum mappable seed search in uncompressed suffix arrays followed by
 seed clustering and stitching procedure. STAR outperforms other aligners
 by a factor of >50 in mapping speed, aligning to the human genome 550
 million 2 × 76 bp paired-end reads per hour on a modest 12-core server,
 while at the same time improving alignment sensitivity and precision. In
 addition to unbiased de novo detection of canonical junctions, STAR can
 discover non-canonical splices and chimeric (fusion) transcripts, and is
 also capable of mapping full-length RNA sequences. Using Roche 454
 sequencing of reverse transcription polymerase chain reaction amplicons,
 the authors experimentally validated 1960 novel intergenic splice
 junctions with an 80-90% success rate, corroborating the high precision
 of the STAR mapping strategy.

rna-star-dbgsym: debug symbols for rna-star