Ubuntu
rna-star package

rna-star 2.7.3a+dfsg-1build2 source package in Ubuntu

Changelog

rna-star (2.7.3a+dfsg-1build2) focal; urgency=medium

  * No-change rebuild for libgcc-s1 package name change.

 -- Matthias Klose <email address hidden>  Sun, 22 Mar 2020 16:56:29 +0100

Upload details

Uploaded by:
Matthias Klose
Uploaded to:
Focal
Original maintainer:
Debian Med
Architectures:
amd64 arm64 ppc64el mips64el
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Focal release universe misc

Downloads

File Size SHA-256 Checksum
rna-star_2.7.3a+dfsg.orig.tar.xz 392.4 KiB 31ce1c59dfcb7786630dadb31900aa28bfff4add297bb81e0a3ca2222299eb2f
rna-star_2.7.3a+dfsg-1build2.debian.tar.xz 366.4 KiB f0a6286e7058568e805affc8df2b31ad689b5b11e545adbd27109c721221f6da
rna-star_2.7.3a+dfsg-1build2.dsc 2.1 KiB 5faa6e5eb22734a43582a68c477ae81f2e0860eb68d9f24b41aa7c3a6c7318a4

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Binary packages built by this source

rna-star: ultrafast universal RNA-seq aligner

 Spliced Transcripts Alignment to a Reference (STAR) software based on a
 previously undescribed RNA-seq alignment algorithm that uses sequential
 maximum mappable seed search in uncompressed suffix arrays followed by
 seed clustering and stitching procedure. STAR outperforms other aligners
 by a factor of >50 in mapping speed, aligning to the human genome 550
 million 2 × 76 bp paired-end reads per hour on a modest 12-core server,
 while at the same time improving alignment sensitivity and precision. In
 addition to unbiased de novo detection of canonical junctions, STAR can
 discover non-canonical splices and chimeric (fusion) transcripts, and is
 also capable of mapping full-length RNA sequences. Using Roche 454
 sequencing of reverse transcription polymerase chain reaction amplicons,
 the authors experimentally validated 1960 novel intergenic splice
 junctions with an 80-90% success rate, corroborating the high precision
 of the STAR mapping strategy.

rna-star-dbgsym: debug symbols for rna-star