rsem 1.3.3+dfsg-2 source package in Ubuntu
Changelog
rsem (1.3.3+dfsg-2) unstable; urgency=medium
[ Steffen Moeller ]
* Fix watchfile to detect new versions on github (routine-update)
[ Andreas Tille ]
* Standards-Version: 4.6.0 (routine-update)
* debhelper-compat 13 (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Use secure URI in Homepage field.
* Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
Repository-Browse.
-- Andreas Tille <email address hidden> Thu, 09 Sep 2021 08:01:13 +0200
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Mantic | release | universe | misc | |
| Lunar | release | universe | misc | |
| Jammy | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| rsem_1.3.3+dfsg-2.dsc | 2.1 KiB | 2a1c68b9e929e1e1dbdf9c187cc2f3b320b929d52cd99d619fbee2ccd1a5e8d5 |
| rsem_1.3.3+dfsg.orig.tar.xz | 268.9 KiB | 43037765382f8942a03595eb12ee2ed68081f9f828cb2832388354a12ee00990 |
| rsem_1.3.3+dfsg-2.debian.tar.xz | 34.0 MiB | 8ce29aa144c3c632a0d124ab182ad23dc626bf56d7df91881804b2063234181b |
Available diffs
- diff from 1.3.3+dfsg-1 to 1.3.3+dfsg-2 (1.3 KiB)
No changes file available.
Binary packages built by this source
- rsem: RNA-Seq by Expectation-Maximization
RSEM is a software package for estimating gene and isoform expression
levels from RNA-Seq data. The RSEM package provides an user-friendly
interface, supports threads for parallel computation of the EM
algorithm, single-end and paired-end read data, quality scores,
variable-length reads and RSPD estimation. In addition, it provides
posterior mean and 95% credibility interval estimates for expression
levels. For visualization, It can generate BAM and Wiggle files in both
transcript-coordinate and genomic-coordinate. Genomic-coordinate files
can be visualized by both UCSC Genome browser and Broad Institute’s
Integrative Genomics Viewer (IGV). Transcript-coordinate files can be
visualized by IGV. RSEM also has its own scripts to generate transcript
read depth plots in pdf format. The unique feature of RSEM is, the read
depth plots can be stacked, with read depth contributed to unique reads
shown in black and contributed to multi-reads shown in red. In addition,
models learned from data can also be visualized. Last but not least,
RSEM contains a simulator.
- rsem-dbgsym: No summary available for rsem-dbgsym in ubuntu kinetic.
No description available for rsem-dbgsym in ubuntu kinetic.
