salmon 0.12.0+ds1-1 source package in Ubuntu


salmon (0.12.0+ds1-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
    Closes: #909767
  * debhelper 11
  * Point Vcs fields to
  * Standards-Version: 4.2.1
  * Remove debian/gbp.conf
  * Build-Depends: libbz2-dev, liblzma-dev
  * Use python3-sphinx exclusively
  * Do not parse d/changelog

 -- Andreas Tille <email address hidden>  Thu, 13 Dec 2018 18:21:38 +0100

Upload details

Uploaded by:
Debian Med on 2018-12-13
Uploaded to:
Original maintainer:
Debian Med
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Focal release on 2019-10-18 universe misc
Eoan release on 2019-04-18 universe misc
Disco release on 2018-12-24 universe misc


File Size SHA-256 Checksum
salmon_0.12.0+ds1-1.dsc 2.4 KiB 4e48c2a9f122d21cf6c089575c554f3f28cda81daabc35f329333bee0e64b6e2
salmon_0.12.0+ds1.orig.tar.xz 6.2 MiB 79c1eb664567ff63416364f63832b075e3dc2939bdcd1a20f4725f224eb4324c
salmon_0.12.0+ds1-1.debian.tar.xz 8.7 KiB 402582021e594e9f7b21f7b699918df6d6ffb6f8c7d1aafaa0ae4f8e390dd4c1

No changes file available.

Binary packages built by this source

salmon: wicked-fast transcript quantification from RNA-seq data

 Salmon is a wicked-fast program to produce a highly-accurate, transcript-level
 quantification estimates from RNA-seq data. Salmon achieves is accuracy and
 speed via a number of different innovations, including the use of lightweight
 alignments (accurate but fast-to-compute proxies for traditional read
 alignments) and massively-parallel stochastic collapsed variational inference.
 The result is a versatile tool that fits nicely into many different pipelines.
 For example, you can choose to make use of the lightweight alignments by
 providing Salmon with raw sequencing reads, or, if it is more convenient, you
 can provide Salmon with regular alignments (e.g. computed with your favorite
 aligner), and it will use the same wicked-fast, state-of-the-art inference
 algorithm to estimate transcript-level abundances for your experiment.

salmon-dbgsym: debug symbols for salmon