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samtools-legacy package

samtools-legacy 0.1.19+dfsg-6ubuntu1 source package in Ubuntu

Changelog

samtools-legacy (0.1.19+dfsg-6ubuntu1) noble; urgency=low

  * Merge from Debian unstable. (LP: #2044194) Remaining changes:
    - Add backport of upstream commit 515f6df as
      d/p/515f6df-Remove-compressBound-assertions-PR-1258.patch
      in support of fixing 'zlib: compressBound() returns an incorrect result
      on z15'.
  * Fixed a couple of spelling errors in the description of
    d/p/515f6df-Remove-compressBound-assertions-PR-1258.patch.

samtools-legacy (0.1.19+dfsg-6) unstable; urgency=medium

  * Team upload.
  * Revert: Add missing build dependency on dh addon.
  * Disable LTO
    Closes: #1015655
  * d/watch: Provide sensible upstream tarball name
  * Standards-Version: 4.6.1 (routine-update)
  * Remove trailing whitespace in debian/rules (routine-update)

 -- Aaron Rainbolt <email address hidden>  Tue, 21 Nov 2023 16:22:27 -0600

Upload details

Uploaded by:
Aaron Rainbolt
Sponsored by:
Simon Quigley
Uploaded to:
Noble
Original maintainer:
Ubuntu Developers
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Noble release universe misc

Downloads

File Size SHA-256 Checksum
samtools-legacy_0.1.19+dfsg.orig.tar.xz 362.2 KiB 485c3dfb668465449b393c5fd3b217f5262bb3f686232f6fddbc22d3c7b2f0bf
samtools-legacy_0.1.19+dfsg-6ubuntu1.debian.tar.xz 10.5 KiB 7fca427aa868d7e46bfaf1304f70c75a0b5cd5e609819db3e1b51a3264ffa3f3
samtools-legacy_0.1.19+dfsg-6ubuntu1.dsc 2.2 KiB 0048ef9f9fee71afeff09b83aa9bd8c291e82162cbcca82b72b487b65f58634e

View changes file

Binary packages built by this source

libbam-dev: manipulates nucleotide sequence alignments in BAM or SAM format

 The BAM library provides I/O and various operations on manipulating nucleotide
 sequence alignments in the BAM (Binary Alignment/Mapping) or SAM (Sequence
 Alignment/Map) format. It now supports importing from or exporting to SAM,
 sorting, merging, generating pileup, and quickly retrieval of reads overlapped
 with a specified region.
 .
 This library is part of SAMtools version 0.1.19. It is obsolete and provided
 only to build software that has not yet transitioned to the HTSlib, which
 replaces this library.